Pairwise Alignments

Query, 303 a.a., Site-specific tyrosine recombinase XerD from Variovorax sp. SCN45

Subject, 330 a.a., site-specific tyrosine recombinase XerC from Sinorhizobium meliloti 1021

 Score =  129 bits (324), Expect = 9e-35
 Identities = 93/288 (32%), Positives = 144/288 (50%), Gaps = 10/288 (3%)

Query: 22  EDGLSKNTLAAYRRDLALFAQWLGEHSGG----ATLGTAKETDLQAYMGARLSNRGKATS 77
           E  LS+ T+ AY RD   F  +L  H  G    + +   +  DL+ ++  R      A +
Sbjct: 45  ERRLSEKTVDAYERDTRQFLTFLTGHLAGPPRLSDICALRPADLRGFLAQRRKGGAGART 104

Query: 78  ANRRLTVFKRYYRWALRERRIAADPSIRLMPARQMPRAIKTLSEKQVDDLLAAPD--VES 135
             R L   + + R+  R     A  +  +   +Q     K L++++   ++ A     E 
Sbjct: 105 LGRGLAGLRSFLRYLERNGLANAAGAGAVRSPKQPKSLPKALTDREALKVVTADAQLAEE 164

Query: 136 P-LGLRDRAMLELMYASGLRVSELVALKAIDMSLNDGVLRVLGKGSKERLVPFGGEARRW 194
           P +  R+ A+L L+Y  GLR++E + L   D S     LRV GKG K R+VP    A   
Sbjct: 165 PWIAARNAAVLTLLYGCGLRIAEALDLTPADFSGPVTSLRVTGKGGKTRIVPMIAAAAEA 224

Query: 195 IERYLEESRPAILDGQQTPDLFVTARGAGMTRVMFWIIVKKHATAAGIHVPLSPHTLRHA 254
           +E Y  +  P  ++ ++   +F  ARGA +   +    ++K   A G+    +PH LRH+
Sbjct: 225 VETY-RKLCPYHIEPEEP--IFRGARGAKLQPAIIQREMQKLRAALGLPDSATPHALRHS 281

Query: 255 FATHLLNHGVDLRAVQLLLGHADISTTTIYTHVARERLKQLHAKHHPR 302
           FATHLL  G DLR +Q LLGHA +STT +YT V   RL +++ + HPR
Sbjct: 282 FATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDSARLLEIYDRAHPR 329