Pairwise Alignments

Query, 303 a.a., Site-specific tyrosine recombinase XerD from Variovorax sp. SCN45

Subject, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

 Score =  122 bits (306), Expect = 1e-32
 Identities = 88/236 (37%), Positives = 124/236 (52%), Gaps = 18/236 (7%)

Query: 74  KATSANRRLTVFKRYYRWALRERRIAADPSIRL--MPARQMPRA-IKTLSEKQVDDLLAA 130
           KA S N RL   K ++R+         D ++R+  MP +++  A + +LS  +V  LL A
Sbjct: 76  KARSRNARLAAVKSFFRYLEHRVPAVLDQALRVHAMPMKKIDEALVASLSRTEVQALLNA 135

Query: 131 PDVESPLGLRDRAMLELMYASGLRVSELVALKAIDM--SLNDGVLRVLGKGSKERLVPFG 188
           PD  S  G+RDRAML L +A GLRVSELV L  +D     +   + ++GKG +ER++P  
Sbjct: 136 PDRRSLSGIRDRAMLHLAFAGGLRVSELVGL-TLDQFDGRSPASIHIIGKGRRERVLPLW 194

Query: 189 GEARRWIERYLEESRPAILDGQQTPDLFVTARGAGMTRVMFWIIVKKHATAAGIHVP--- 245
            E    I  ++     A+        LF+   G  MTR  F  I++KHA AA    P   
Sbjct: 195 QETAAAIRAWI-----AVRPKNGDTALFLNNAGRMMTRSGFEYILEKHAAAAVSVAPTLA 249

Query: 246 ---LSPHTLRHAFATHLLNHGVDLRAVQLLLGHADISTTTIYTHV-ARERLKQLHA 297
              +SPH LRH+ A H+L    D+R V L LGHA + +T IY      E+L+ L A
Sbjct: 250 TKSISPHVLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIYLRADPTEKLEMLDA 305