Pairwise Alignments

Query, 249 a.a., Glutamine ABC transporter, substrate-binding protein GlnH from Variovorax sp. SCN45

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (281), Expect = 5e-30
 Identities = 73/249 (29%), Positives = 128/249 (51%), Gaps = 15/249 (6%)

Query: 1   MKKLVLRLLAAAAVATSAIAPATAAGPLLVAVDTAFVPFEFK-EGDKYVGFDIDLWDAVA 59
           MKK++L  L     A++A     A   +   ++  + PFE+  E ++  GFD+DL +A+ 
Sbjct: 1   MKKILLASLIGLVSASAA-----AQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALC 55

Query: 60  KELKLDYKLQPMDFNGILPALQTKNVDVALAGITIKEERKKVIDFSDGYYDSGFILMVPT 119
           K+L+         F+ ++PAL+ K  D A++ + I E R + ++FS+ YYD+     V  
Sbjct: 56  KQLEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNS-AAFVSL 114

Query: 120 ASKIAGVADLKGKTLAIKTGTSAADYAKANFAGTELRQFPNIDNAYLELMTGRVDAAMHD 179
           A K+A  A LKGK + ++ G++   +     +      + +  +A++++  GR+D+   D
Sbjct: 115 AGKVADQAALKGKRVGVQNGSTHQSFLLEQLSDVVAVPYSSYQDAFIDMKNGRIDSVFGD 174

Query: 180 TPNVLYYIATAGAGKARAVGPQMM-AQQYGIGF-----PKGSPLVVQVNGALAKIKADGR 233
           T  V  +    G      VG ++  AQ +G GF          L+ Q+N AL  +K +G 
Sbjct: 175 TAVVAEWF--KGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGE 232

Query: 234 YAAIYRKWF 242
           YAAI+ K+F
Sbjct: 233 YAAIFNKYF 241