Pairwise Alignments

Query, 363 a.a., FIG002207: Probable transmembrane protein from Variovorax sp. SCN45

Subject, 365 a.a., lipoprotein-34 NlpB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.0 bits (136), Expect = 8e-13
 Identities = 68/315 (21%), Positives = 124/315 (39%), Gaps = 32/315 (10%)

Query: 16  LVASLAACSV-LESDKI----DYKSAGKAPTLEVPPDLSQLSRDNRYAIPGGAVTANAYQ 70
           LVA++AACS  LE  +     DY  A +AP L++P  L     +  Y +P     AN   
Sbjct: 10  LVAAVAACSSPLERRQANGGEDYVQAEQAPMLKIPEGLKTPPYNKEYDVPALGPKANPAL 69

Query: 71  AGIANAPGVPTAVSNIGDVKMERSGTQRWIVVNRT-------PEQLWEPVRDFWQESGFL 123
            G       P  V  + +      G+    +V  +        ++++  + DF+ +    
Sbjct: 70  VGKNLDIRPPLQVLPMAEGTHVEEGSDNIKIVVESIDNNVDLKQEIFTNLDDFFAKQAIP 129

Query: 124 LTTDQRNLGIMETDWAENRAKLPQDIIRGTLGKLVDSVYSTGELDRFRTRLERTPNG-TE 182
           + +   + G +ETDW E+R  L   +         D  Y   +  R+R  +E  P+G T 
Sbjct: 130 IRSRDFDKGSIETDWIESREVLESSLWGS------DKEYLLRQ--RYRFDVETRPHGRTA 181

Query: 183 IFISHRGMQEVYNNSRQDQTVWQPRPSDPELETEFLRRLMVKLGVSQEQSKILAATTAPA 242
             + H    E + + ++ Q V            + L   +  + V +EQ+ I A      
Sbjct: 182 NIVIHLVEHEEFYDGKE-QKVMLSGEDKQRYTIDMLNSAIAYMSVKREQT-IQANRLKQT 239

Query: 243 RTATIAKVGNQPAV---QISEGFDRAWRRVGLALDRTGFTVEDRDRSAGLYFVRYVPPNP 299
               +  +  +           + + W R+ + L   GF + D D + GLYF+++     
Sbjct: 240 LGINVDLITPEEGAAYWSAKAAYKQVWDRLRIVLPEMGFEISDMDSAKGLYFIKFT---- 295

Query: 300 DKKEPGFFGKLFSGS 314
                GF+  L++ +
Sbjct: 296 --DNSGFWSSLWNNN 308