Pairwise Alignments

Query, 348 a.a., Probable RNA methyltransferase PA1839 from Variovorax sp. SCN45

Subject, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

 Score =  146 bits (369), Expect = 7e-40
 Identities = 94/272 (34%), Positives = 144/272 (52%), Gaps = 19/272 (6%)

Query: 72  ADGSERLLVALADGQTVESVLLPRDG---LCVSSQVGCAVGCQFCMTGRDGLLRQVGSAE 128
           ADG+ +  + + D Q VE+V +P D    LCVSSQVGCA+ C+FC T + G  R +  +E
Sbjct: 78  ADGTIKWAMRVGD-QDVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSE 136

Query: 129 IIAQVALARM---------RRPVRKVVFMGMGEPAHNLDNVLEAIEL-LGTVG-NVGHKN 177
           II QV  A           RRP+  VV MGMGEP  N+ N++ A+E+ L  +G  +  + 
Sbjct: 137 IIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIPALEIMLDDLGFGLSKRR 196

Query: 178 LVFSTVGDPRVFNRLLQERVRPALALSLHTTKAELRRKLLPRAPNMTPEELVAEGERY-- 235
           +  ST G      +++ + +  ALA+SLH    +LR +++P       E  +    RY  
Sbjct: 197 VTVSTSGVVSGLEQMIGQ-IDVALAISLHAPNDKLRSEIMPINDRWNIEAFLEVVRRYIA 255

Query: 236 -ARATGYPIQYQWTLLEGVNDGQDEIDGIVRLLSGKYCVLNMIPFNAVDGVAFSRPSWER 294
            + A    +  ++ LL+ VNDG +    +  LL G  C +N+IPFN   G  + +PS  R
Sbjct: 256 SSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIPFNPYPGSPYKKPSNSR 315

Query: 295 CEQVARTLHERGILTKLRNSAGQDVDGGCGQL 326
            ++  +TL +      +R + G D+D  CGQL
Sbjct: 316 IDRFQKTLMQYEHTVTIRKTRGDDIDAACGQL 347