Pairwise Alignments

Query, 403 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 405 a.a., Arabinose efflux permease from Pseudomonas fluorescens FW300-N2E2

 Score =  144 bits (362), Expect = 6e-39
 Identities = 102/351 (29%), Positives = 170/351 (48%), Gaps = 10/351 (2%)

Query: 20  LLALAAASFITILTEAMPAGLLPQIGASLAVTPALVGQLVTVYALGSLVAAIPLVAFTRG 79
           +LA++ A+F+ + +E MP  LL  + A L V+    GQ + V    +L+ ++ + +    
Sbjct: 16  VLAMSLAAFVLVASEFMPVSLLTPVAADLHVSEGQAGQGIAVSGAFALITSLFIASIAAQ 75

Query: 80  WRRRPLLMLAIGGFAIVNTVTALSHSYPLTLAARFFAGVFAGLLWALVAGHAGRMVPPSM 139
             R+ LL+       +  TV A + +YP+ +  R   GV  G  W+L A  A R+VP   
Sbjct: 76  VDRKWLLLGLTLLMIVSGTVVAFAPNYPVFMLGRALIGVAIGGFWSLSAATAMRLVPDDQ 135

Query: 140 QGRAIAVAMLGAPLALSLGIPAGTLLGTGVGWRPAFLVMSALSVLLLGWVRWQVPDFPGQ 199
             +A+A+   G  LA  +  P G+ LG  +GWR AF  +  ++ + L W+  ++P  P Q
Sbjct: 136 VPQALAIVNGGNALATVVAAPLGSFLGAIIGWRGAFFCIVPVAAIALVWLLLRLPSMPSQ 195

Query: 200 EAGRRQSVKRVFLLPGVRPVLGVMLA---FVLAHNILYTYIAPFLAHAG--LGARVDLVL 254
               ++    VF L    PV   MLA   F +   +L+TY+ PFL        + +  +L
Sbjct: 196 ---AKRGGTNVFKLMTRAPVALGMLAVSTFFMGQFMLFTYLRPFLETVTQVSVSMLSFML 252

Query: 255 LVFGTASLAGIWVTGVLIDRWL-RELVLASTAVFGLTALLLGTAAGSTAAVYVGVAIWGL 313
           LV G A L G ++ GV +   L R L++    +  +   L+G     T A ++ + +WGL
Sbjct: 253 LVIGVAGLLGTFLIGVCLKNNLYRTLIVIPLLMAAIAIALVGFGGSITIATFL-LGLWGL 311

Query: 314 AYGGAGTLFQTASAQAAGESADVAQSMVVTVWNIAIAGGGLLGGLLLQGGG 364
               A   + T  ++   E A+    ++V +  +AIA G  +GGLL    G
Sbjct: 312 VATAAPVGWWTWLSRTLPEDAEAGGGLMVAIVQLAIAAGATVGGLLFDLSG 362