Pairwise Alignments

Query, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 527 a.a., ABC transporter permease subunit from Synechocystis sp000284455 PCC 6803

 Score =  127 bits (320), Expect = 3e-34
 Identities = 73/200 (36%), Positives = 111/200 (55%), Gaps = 6/200 (3%)

Query: 17  LLKGTWITIQLSLIATVLGLVVAIFCAWGKTSGPGWLRFIINAYIEVIRNTPFLVQLFFF 76
           L KG+ +T+ L+  +   GL+     A    S    L+ I   Y+E  R TP LVQLF  
Sbjct: 307 LFKGSILTVLLTAFSVFFGLIGGTGVAIALISDIKPLQLIFRIYVEFFRGTPMLVQLFII 366

Query: 77  FFALPAI------GLRWSPQTAALVAMVVNLGAYATEIIRAGIESIPKGQIEAGRALNLK 130
           +F LPA+      G+      AA++A+ +N+ AY  EIIR GI+SI +GQ EA  +L + 
Sbjct: 367 YFGLPALFKEIGLGITIDRFPAAIIALSLNVAAYLAEIIRGGIQSIDQGQWEACESLGMS 426

Query: 131 PWEIFRFVIIKPALKAIYPALTSQFILLMLSSAVVSVISADDLTSVAANLQSQTFRSFEI 190
           PW+  + VI   A + I P L ++FI L+  +++ +VI   +L      + + T+R+FE+
Sbjct: 427 PWQTMKEVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQELFREGQLIVATTYRAFEV 486

Query: 191 YIVVAAIYLALALAFSAMFK 210
           YI VA +YL L    S +FK
Sbjct: 487 YIAVALVYLLLTTISSFVFK 506