Pairwise Alignments

Query, 265 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 265 a.a., ABC transporter periplasmic substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  201 bits (511), Expect = 1e-56
 Identities = 106/246 (43%), Positives = 152/246 (61%)

Query: 19  ALTVFAPFACAQSVADIKKKGEITIGMLVDFPPYGTTDAKNQPDGYDADVAKLLAKDWGV 78
           A+TV A  A A S+ DI  + ++ IG+ +  PP+G T+ + QPDG D DVAKLLAKD GV
Sbjct: 17  AITVGAATASASSLDDIIARKKVMIGVDLSVPPFGITNEEMQPDGLDVDVAKLLAKDLGV 76

Query: 79  KANIVPVTGPNRIPFLLTNKVDLLVASLAITPERAKQVQFSQPYAAATIVLYGASKTPIK 138
           +  +VPVTG +RIP L T KVD +VAS  I  ERA  V FS PY     ++    +  IK
Sbjct: 77  ELELVPVTGQSRIPSLQTGKVDFVVASFGIYTERALSVAFSNPYGGHRSIIIAPKEATIK 136

Query: 139 AAADLKGLRVGVARASTQDVAVTKAAPEGTEIRRFDDDASAMQALISGQVDAIGCSVTVA 198
           + ADL G RVGV R +  +  ++ A  EG E+ RFDDD++ + AL+SGQVDAIG    +A
Sbjct: 137 SLADLAGKRVGVPRGTAHEKILSAANVEGMELVRFDDDSTTLNALVSGQVDAIGTVNYIA 196

Query: 199 AQIAKRVPANTYENKFTLVQQSMGIAMRPGQEELTKAVNEFVQKNTANGELNKLYQKWLQ 258
           AQ+ +R P   +E K T +Q   G+ +R    +L   +N  +  +  +GEL  +Y+KW++
Sbjct: 197 AQLQERYPDRGFEEKTTYLQSFYGVGLRRNDPDLLHWLNTVLFVHKQSGELGAIYEKWMK 256

Query: 259 VDLPKM 264
             +P++
Sbjct: 257 TPIPEL 262