Pairwise Alignments

Query, 265 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 268 a.a., amino acid ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  121 bits (304), Expect = 1e-32
 Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 7/262 (2%)

Query: 8   RAAIAALGLGAALTVFAPFACAQSVADIKKKGEITIGMLVDFPPYGTTDAKNQPDGYDAD 67
           + ++ A GL AA  + +P A A  + DI   G +   +++DFPP G+ D  N+P G+D D
Sbjct: 2   KTSVLAFGLVAATALTSP-AHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFDVD 60

Query: 68  VAKLLAKDWGVKANIVPVTGPNRIPFLLTNKVDLLVASLAITPERAKQVQFSQPYAAATI 127
               LA   GV A IV    P RIP L++ +VD+ VAS + T ERAK V  + PY A  +
Sbjct: 61  YCNDLATALGVTAEIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGMTVPYFAFEM 120

Query: 128 VLYGASKTPIKAAADLKGLRVGVARASTQDVAV---TKAAPEGTEIRRFDDDASAMQALI 184
            +    K+ IK+  D+KG  VG    + + +A+    KA  EG E R +   A    AL 
Sbjct: 121 AVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEG-EFRPYQTQADVFLALS 179

Query: 185 SGQVDAIGCSVTVAAQIAK--RVPANTYENKFTLVQQSMGIAMRPGQEELTKAVNEFVQK 242
            GQ+DA   + TVA    K  + P  +  +K       + +     +      +N FV +
Sbjct: 180 QGQLDATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFLNYLNLFVNQ 239

Query: 243 NTANGELNKLYQKWLQVDLPKM 264
               G   +LY+KW+  + P +
Sbjct: 240 QVRTGRYAELYEKWVGGEAPSL 261