Pairwise Alignments

Query, 251 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  283 bits (725), Expect = 2e-81
 Identities = 144/245 (58%), Positives = 181/245 (73%), Gaps = 13/245 (5%)

Query: 6   IIRMEAVNKWYGEFQVLTGIDLSVRQGERIVICGPSGSGKSTLIRCINRLETVQKGRIVV 65
           +I    V+KWYG+FQ L  I L+V +GE +VICGPSGSGKSTLIR +N LE++  G I+V
Sbjct: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62

Query: 66  ----DGIDLTAGGKNIDAVRAEVGMVFQQFNLFPHLTILENCTLAPKRSRGMTKAQAEEI 121
               D     +G         ++GMVFQ FNLFPHLT+LEN TLAP R+  ++  +A+E 
Sbjct: 63  LPELDERTRRSG---------KIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKER 113

Query: 122 AMKYLTRVRIPEQANKYPSQLSGGQQQRVAIARALCMTPKIMLFDEPTSALDPEMVKEVL 181
           A  +L RV+I +Q +KYP QLSGGQQQRVAIAR+LCM P+I+LFDEPTSALDPE + EVL
Sbjct: 114 AYHFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVL 173

Query: 182 DTMIGLAEDGMTMLCVTHEMGFARSVADRVIFMAEGKIVEQAPPEEFFGNPKDERTRQFL 241
           + M+ LA+DG+TM+CVTHEMGFAR VA RV+FM EG+I+E   PE+ F NP   RT+QFL
Sbjct: 174 EVMVDLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQFL 233

Query: 242 GQILS 246
            QILS
Sbjct: 234 NQILS 238