Pairwise Alignments

Query, 597 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (446), Expect = 5e-48
 Identities = 125/396 (31%), Positives = 202/396 (51%), Gaps = 26/396 (6%)

Query: 204  LLQQVRLEKEAAERSDLEKSRFLAAASHDLRQPVHAMSLFLGLLANERLSEHGRYLLENI 263
            L +Q+    + +ER    KSRFLAA SHDL QP++A  LF   L+        + L  +I
Sbjct: 771  LNKQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAKEAEVQKLAHHI 830

Query: 264  TKASAAMGHLFDALLNISRLDAGVIHPRVQSFPLDRLLDQIRTEYTPQAQQKGLALKVRR 323
              A  A   L   LL+ISRL++G I     SF +  +L  +  E++  A ++G+   +  
Sbjct: 831  ESALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVP 890

Query: 324  CAACVRSDPMLLERILRNLVSNAIAHTPHGRVLIGCRKRGDA-VRIEVWDTGPGIPKHEH 382
                V SDP LL R+++N ++NA  + P+G+V++G R+     VRI+VWD G GI + + 
Sbjct: 891  SLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQ 950

Query: 383  ERVFWEFHQLRNPERDRSKGLGLGLAIVRRTAALLGHTLSLRSVEGRGTVFLLSVDAQQA 442
            + +F EF+  R  +    +GLGLGLAI +  A +LGH +S+RS  G+G+VF +++D  Q 
Sbjct: 951  QEIFEEFN--RGGQVRSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQ- 1007

Query: 443  AAPETPTEANAFAAMQAHAPAISAPPAKPATSQLILVIDDDAQNREGLKLLLESWGHRVI 502
              P + T+  A    +                  +L +D++     G++ LLE WG  V 
Sbjct: 1008 PMPSSLTQTVAMVNEK----------GSELQHLRVLCVDNEPDILVGMRDLLERWGCEVK 1057

Query: 503  AAP---GTAELVELTADVPGK--PGLIVSDYRLREHETGVEAIDRLHEEYNDATIPALLV 557
             A    G+ + +E      G+  P +I+SDYRL    TG+E + +      D     +++
Sbjct: 1058 TATDIHGSLKALE------GQWIPDVILSDYRLDNGRTGLEVLQQCRLRLGDC-FAGVII 1110

Query: 558  SGDTDPARLIEAAARAIPILHKPVEVEALRDWVDKL 593
            S D +P  L    +     + KP++   LR  ++ L
Sbjct: 1111 SADRNPDILDGIESSGFRFMAKPIKPLKLRALLNSL 1146