Pairwise Alignments

Query, 623 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

 Score = 45.8 bits (107), Expect = 5e-09
 Identities = 21/44 (47%), Positives = 32/44 (72%)

Query: 273 SYVVQPGDSLGKIAKLYRTSIAAIKEGNGLRSDRIYPGEVLSIT 316
           ++VV+ GD LGK+A  Y+ S+A+IK+ N L+SD +  G+ L IT
Sbjct: 483 THVVKTGDFLGKLATTYKVSVASIKKENNLKSDTLVLGQKLKIT 526



 Score = 42.0 bits (97), Expect = 7e-08
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 15/90 (16%)

Query: 264 ASLGKKTSKSYVVQPGDSLGKIAKLYRTSIAAIKEGNGLRSDRIYPGEVLSITARDEERS 323
           A+ GK  ++ + VQ G+S+G IA  Y  S+ A+K+ N L+S  I  G++L+I A      
Sbjct: 410 ANRGK--AQKHKVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTIPA------ 461

Query: 324 REQKASPPPVKPTAPTPVSAGAASAAPPKH 353
               ++P PV    P PV A         H
Sbjct: 462 ---SSAPNPV----PVPVMANPVETETITH 484



 Score = 40.4 bits (93), Expect = 2e-07
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 255 VAGSEKLNSASLGKKTSKSYVVQPGDSLGKIAKLYRTSIAAIKEGNGLRSDRIYPGEVLS 314
           V G +   + SL  K  + + VQ G+ L KIA  Y  S+ +I++ N LR+D++  G+ L 
Sbjct: 518 VLGQKLKITVSLKDKPLRKHKVQRGEFLSKIADQYNVSVDSIRQANQLRTDQLLVGQQLI 577

Query: 315 I 315
           I
Sbjct: 578 I 578