Pairwise Alignments

Query, 264 a.a., Hydroxymethylpyrimidine ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

 Score =  183 bits (465), Expect = 7e-51
 Identities = 104/234 (44%), Positives = 148/234 (63%), Gaps = 6/234 (2%)

Query: 33  AIKSLDLDVAQGEFLTLLGPSGCGKSTFLRVVADLLQPSRGHIEVLSSTPQAARKNRDIG 92
           A+K + L++  GEF++L+G SGCGKST L ++A L QPS G I  +    Q      D  
Sbjct: 24  ALKDVSLNIRPGEFISLIGHSGCGKSTLLNLIAGLAQPSSGGI--ILEGRQVTEPGPDRM 81

Query: 93  FVFQDAALLPWRTALQNVELPLQ-VGGGASRKGRRSP-RELLELVGLKDRLNAFPHEMSG 150
            VFQ+ +LLPWRT  QN+ L +  V    +R  RR+   E ++LVGL+   + +PHE+SG
Sbjct: 82  VVFQNYSLLPWRTVRQNIALAVDSVLHDRNRTERRTIIEETIDLVGLRAAADKYPHEISG 141

Query: 151 GQRQRVSIARALASDPKILLMDEPFGALDEITRDRLNEEILRVWRETGVTILFVTHSIHE 210
           G +QRV+IAR LA  PK+LL+DEPFGALD +TR  L E+++R+ +E GVT + VTH + E
Sbjct: 142 GMKQRVAIARGLAIRPKLLLLDEPFGALDALTRGNLQEQLMRICQEAGVTAVMVTHDVDE 201

Query: 211 AAFLGQRVLMLAANP-GRVREIVPVELPAER-TLEVRETPEFVRLTSHLRRVLE 262
           A  L  RV+ML   P  ++ +I+ V+ P  R  LE+ ETP +  L + L   L+
Sbjct: 202 ALLLSDRVVMLTNGPAAQIGQILEVDFPRPRQRLEMMETPHYYDLRNELINFLQ 255