Pairwise Alignments

Query, 385 a.a., Domain of unknown function / Efflux ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 370 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 99/394 (25%), Positives = 166/394 (42%), Gaps = 43/394 (10%)

Query: 2   LLALIRKELLALVRDMHGLAALFVMPMVFIVLMSLTLKDIYRPPLAELTYAIDMRDTATP 61
           L ALI KELLA++RD  G   L   P++ +++ S      Y   L E+T    M      
Sbjct: 6   LKALIVKELLAVLRDPKGRTVLIGPPIIQLLVFS------YAATL-EVTNVDLMVLNRDN 58

Query: 62  AQWLKQLWQRNHGAP-----QPLGDDWQARLRNGSLKYVIVMEQG--LSEELESAALSTQ 114
             W ++L Q+  G+P     +      + RL   + + + V+E G   S ++E+      
Sbjct: 59  GHWSQELVQQVGGSPTFRSIELASSPHEVRLAIDTQRVLAVVEIGPTFSRDIEAGR---P 115

Query: 115 ARVHLLTEPGIDANLFNALRAELVGASGELKARLALAVPGTAGPAPDASIQAMVRAERFS 174
           A V ++    +D    NA +      SG L  R+  AV     PA   +    +R E  +
Sbjct: 116 AEVQMI----LDGRRSNASQI----VSGYL-GRIVGAVAAET-PAGKRAASETIRVEARN 165

Query: 175 TAGPRPTS---VQQNVPAWLVFGMFFVVASLSSLFVQERSSGALGRLQSLGVSRFTLLAS 231
              P  T    +  N+ A +   +  +V +LS    +ER  G   +L    +    +L  
Sbjct: 166 WFNPNLTYQWFMVPNLVASIALLIGLIVTALS--VARERELGTFDQLIVSPLRTHEILLG 223

Query: 232 KALPYLGVNALQAVLMIAAGIWF--MPLIGGDALSLAGIHWGALLLSLAAVSLAAVSLSL 289
           K +P + +      + I A ++   +PL G   L      +G+ +  LAAV    V L L
Sbjct: 224 KLIPPMMIGLFHITIYILAAVFIFGVPLRGSLFLL-----YGSAIFYLAAV----VGLGL 274

Query: 290 ALACLVRSHAQAATIGPMVNVLMAAAGGIMVPKFVMPGFMQRLVEISPMNWGLEALLTVL 349
            ++ L  +  QA     +  V      G   P   MP ++Q +  I+P+ + L  +  V 
Sbjct: 275 FISALSMTQQQAILGAFLFMVPAMLLSGFATPIENMPSWLQPVTLINPLRYFLVIVKGVF 334

Query: 350 LRGGGVADALPQIGRLVVFAALMFFIAVFLFRRR 383
           L+   +A+ + Q   L + A +    A +LFRRR
Sbjct: 335 LKDIPLAEVVHQTLPLCLIAIVTLSSAAWLFRRR 368