Pairwise Alignments

Query, 385 a.a., Domain of unknown function / Efflux ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 375 a.a., ABC transporter, permease protein, putative (RefSeq) from Shewanella amazonensis SB2B

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 22/214 (10%)

Query: 178 PRPTSVQQNVPAWL-VFGMFFVVASLSSLFVQERSSGALGRLQSLGVSRFTLLASKALPY 236
           P   +V   VP  L V     +V   S+  V+ER  G +  L +  V    L+  K LPY
Sbjct: 174 PEQRTVVNIVPGLLGVILTMTMVLFTSAAIVREREQGNMEFLITTPVKPLELMLGKILPY 233

Query: 237 LGVNALQAVLMIAAG--IWFMPLIGG-DALSLAGIHWGALLLSLAAVSLAAVSLSLALAC 293
           + V  +Q  +++ AG  ++ +P+ GG ++L+LA +             LA+++L L ++ 
Sbjct: 234 VLVGFVQVAIILGAGKLLFALPIRGGLESLALAAM----------LFILASLTLGLVIST 283

Query: 294 LVRSHAQAATIGPMVNVLMAAAGGIMVPKFVMPGFMQRLVEISPMNWGLEALLTVLLRGG 353
           + R+  QA  +   + +      G M P   MP   Q + E  P    +     ++LR  
Sbjct: 284 IARTQLQAMQMTVFILLPSILLSGFMFPYEAMPVPAQWIAEALPATHFMRMSRAIILRDA 343

Query: 354 GVA----DALPQIGRLVVFAALMFFIAVFLFRRR 383
            V     DAL  +G    F AL   +A   F +R
Sbjct: 344 EVTQLGFDALWLLG----FCALGLLVATLKFNKR 373