Pairwise Alignments

Query, 385 a.a., Domain of unknown function / Efflux ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 378 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 86/391 (21%), Positives = 159/391 (40%), Gaps = 35/391 (8%)

Query: 2   LLALIRKELLALVRDMHGLAALFVMPMVFIVLMSLTLKDIYRPPLAELTYAIDMRDTATP 61
           + A+  KEL+ + RD      +  +PM+ ++L    +         +  +   + +  +P
Sbjct: 10  MAAIFFKELIQMRRDRLTFGMMLSVPMLQLILFGFAIN-------TDPKHLATVLNIQSP 62

Query: 62  AQWLKQLW--QRNHGAPQPLGD-----DWQARLRNGSLKYVIVMEQGLSEELESAALSTQ 114
           + + + L     N G    +G+     +    L  G +++V+ +    S EL+       
Sbjct: 63  SAFSRDLTAAMSNSGYFDIIGEVSSEAEIDRLLDMGEVQFVLTIPPEFSSELQKGNRPVV 122

Query: 115 ARVHLLTEPGIDANLFNALRAELVGASGELKARLALAVPGTAGPAPDASIQAMVRAERFS 174
                 T+P   +N  + +        G+L AR A         AP    +  +     S
Sbjct: 123 LMEVDATDPAATSNALHVI--------GQL-ARTAFDRHLVGPLAPLKVGEDPIDLRIHS 173

Query: 175 TAGPRPTSVQQNVPAWLVFGMFFVVASLSSLFV-QERSSGALGRLQSLGVSRFTLLASKA 233
              P   S    VP  +   +   +  ++SL + +ER    +  L S+ V    ++  K 
Sbjct: 174 RYNPEANSQYNVVPGLMGVILTMTMVMMTSLAITRERERDTMETLLSMPVRPLEVMIGKI 233

Query: 234 LPYLGVNALQA-VLMIAAGIWF-MPLIGGDALSLAGIHWGALLLSLAAVSLAAVSLSLAL 291
           LPY+G+  +Q  V++IAA + F +P++G           G L L L     A +++ L  
Sbjct: 234 LPYIGLGYIQIIVVLIAARLLFDVPVVGS---------LGLLALLLLLFIAANLAIGLTF 284

Query: 292 ACLVRSHAQAATIGPMVNVLMAAAGGIMVPKFVMPGFMQRLVEISPMNWGLEALLTVLLR 351
           + L  +  QA  +     +      G M P   MP + Q L EI P+   L  +  +LL+
Sbjct: 285 SALSANQFQAMQMSFFYFLPALLLSGFMFPFRGMPVWAQVLGEILPLTHFLRVVRGILLK 344

Query: 352 GGGVADALPQIGRLVVFAALMFFIAVFLFRR 382
           G G     P++    +F  + F IA+ +FR+
Sbjct: 345 GNGFWQVWPELWPQALFTLVAFAIALKVFRK 375