Pairwise Alignments

Query, 562 a.a., Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydD subunit from Variovorax sp. SCN45

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  129 bits (324), Expect = 3e-34
 Identities = 103/428 (24%), Positives = 192/428 (44%), Gaps = 32/428 (7%)

Query: 144 IFILCAVAYFSWVAALVLLFAAPLIPIFMAIVGWRAKAASEAQMVEMGGMNAFLLDRLRG 203
           I +L  + + SW  +LVL+  AP++   ++ V  R +  S      MG + +     L+G
Sbjct: 154 IGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKG 213

Query: 204 LATLRALDAVDATAHRLGDAAQSLRVRTMAVLRIAFLSSAVLELFSALGVAMVAVYVGFH 263
              + +    +    R    + S+R +TM ++    ++  V+++ ++L +  V       
Sbjct: 214 HKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVD 273

Query: 264 LLGSLGFGTWGQPLSLGEGLFVLLLAPAF--FEPLRELSAVWHDRAAGEAALEALDGLQR 321
            + +           L  G F ++ +  F    PL+ L++V  +   G AA + L GL  
Sbjct: 274 SIRA----------ELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMD 323

Query: 322 HALPLPGANASLKRAAAGSAVAAPAIAVHGLHFSWPGETREVFDGLELRVSAGEHIALTG 381
                       +R           + V  + F++ G+ +     +   +  G+ +AL G
Sbjct: 324 LETERDNGKYEAERVNG-------EVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVG 376

Query: 382 PSGSGKTALLSLLAGLVPATSGEIAIGGVALTDHTIASLRQRMAWMGQAPHVFAGSVEAN 441
            SGSGK+ + +L        SG I + G  + D+ + +LR+  A + Q  H+F  ++  N
Sbjct: 377 RSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANN 436

Query: 442 VA-LGRTDVDTPRVTEAMRFA-ALDAVAQAHPG--TALGEGGRGLSGGEAVRLALARIAV 497
           +A     +    ++ +A R A A++ +     G  T +GE G  LSGG+  R+A+AR A+
Sbjct: 437 IAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIAR-AL 495

Query: 498 HPHADLLLVDEPTAHLDSETAARVGDALVELARGKTLIVATH--------DPVLAARMDR 549
              A +L++DE T+ LD+E+   +  AL EL + KT++V  H        D +L      
Sbjct: 496 LRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGE 555

Query: 550 VVSLGAEA 557
           ++  G  A
Sbjct: 556 IIERGRHA 563