Pairwise Alignments

Query, 571 a.a., Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydC subunit from Variovorax sp. SCN45

Subject, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  121 bits (303), Expect = 1e-31
 Identities = 104/440 (23%), Positives = 189/440 (42%), Gaps = 27/440 (6%)

Query: 135 RLTSDIDALESLYLRLLVPAAAALGAALLAGMVLGFMHVAMGAALALWLVFAGWGIAIV- 193
           R   + +++   +    + +   L  ALL  +++  M     A   +W+   G  I ++ 
Sbjct: 252 RHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLM-----AGHLVWVPVIGVLILVIY 306

Query: 194 ---VARRARRPAIRRAHAIEALRARAVDLVAGQTDLVMAGRIDAQREALMRADAQLAQAD 250
              +  R +R     +       A  ++ +AG   + + G     +     A A +A  +
Sbjct: 307 SFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMANWN 366

Query: 251 LALNRLEAASGFAYGSAGTLTLVGVLLVVGALVSEGVIGAPAAALALLVALTATEPFAAL 310
           +   R+  +     G       +G+++V   L+S G +       A +++  A  P   L
Sbjct: 367 IKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQL 426

Query: 311 RRGALDAGRTWLAVRRLAPRMELAEDDATSAKPEDDAPFA---LQLKNITVTHPGSRAEV 367
              +    +   ++  +   M +  D+    K     P     ++L  +T  +P S    
Sbjct: 427 SLLSTRYNQAKSSMTIIEQVMSMP-DEQEEGKRYIHRPIIQGKIELDRVTFHYPNSPIAS 485

Query: 368 LSDVSLTLQAGERVALVGTSGAGKSTLLAAIAAEITPRSGTVSAQPACL----------- 416
           + D+SLT+  GE+VA++G  G+GK+TL   I     P  G V      +           
Sbjct: 486 VRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRN 545

Query: 417 ---LTQRTELFQDSLRDNLRLADPTASDERLWSVLQAAGLEADVRALSTGLDTRLGEGGL 473
              + Q + LF  S+RDN+ L  P + D  +      AG+    +    GL+ ++GEGG+
Sbjct: 546 IGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGM 605

Query: 474 GLSGGQSRRLALARLLLRPVPLWLLDEPTEALDAAVAHDVMQRLAQHAGPRTLLIATHLR 533
            LSGGQ + +++AR  L   P+ L+DEPT A+D      + Q+L+Q     TL++ TH  
Sbjct: 606 LLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKT 665

Query: 534 REAALADRLVCMRHGRIVAD 553
               + DR++ M  G I+AD
Sbjct: 666 SMLDVVDRVIVMEKGCIIAD 685