Pairwise Alignments

Query, 537 a.a., Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) from Variovorax sp. SCN45

Subject, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

 Score =  624 bits (1609), Expect = 0.0
 Identities = 300/506 (59%), Positives = 387/506 (76%), Gaps = 4/506 (0%)

Query: 3   LDIVALSRLQFAVTALYHFLFVPLTLGLSIIIAIMETVYVMTGRVIWRDMTKFWGVLFGI 62
           +D+V LSRLQFA+TA+YHFLFVPLTLG++ ++AIME++YVMT + I++DMTKFWG LFGI
Sbjct: 15  IDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGI 74

Query: 63  NFAMGVATGIVMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMAFFMEATFVGLFFFGWDKL 122
           NFA+GVATG+ MEFQFG NWSYYSHYVGDIFGAPLAIE L+AFF+E+TFVGLFFFGWD+L
Sbjct: 75  NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRL 134

Query: 123 SKVGHLIATWAVAIGSNFSALWILIANGWMQNPVGAAFNPQTMRMEVTDFAAVLTNPVAQ 182
           SK  HL+ TW VA+GSNFSALWIL+ANGWMQNPVG+ FN +TMRME+  FA V+ NPVAQ
Sbjct: 135 SKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQ 194

Query: 183 AKFVHTVSAGYVCAAVFVLGVSAWYLLKGRHLELAKRSMTVAASFGLAAALSVAVLGDES 242
            KFVHTV+AGY   A+F+LG+SA+YLLKGR +  A+RS  +AASFG+A+ LSV VLGDES
Sbjct: 195 VKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDES 254

Query: 243 GYLSGEHQKMKLAAIEAMWETQPAPAAFTVIGFPDQEARETHYAIHIPGVMGLIGTRSLD 302
           GY  GE Q++KLAAIE+ W T+PAPAAFT+ G P+QE   T YAI IP  +G+I TRSLD
Sbjct: 255 GYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSLD 314

Query: 303 TVMPGIDELVKRAEVRIREGLKAYDALQKIREAGGTGKVTQGVRGDFEDNGINMGYALLL 362
             + G+ +L      RIR G+ AYD L+++R     G+ T      F++   ++GY LLL
Sbjct: 315 EQVVGLRDLRDEHVERIRTGIYAYDLLERLR----AGEKTPENMAAFDEVKHDLGYGLLL 370

Query: 363 KRYVDDPRQATDEQITKAAWDTVPQVAPLFWLFRVMVGIGVLLIVLTATFFVLSARRKLD 422
           KRY D    AT+EQI  AA D++P V PLFW FR+MV  G +++V+    F+ + R+K++
Sbjct: 371 KRYTDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIE 430

Query: 423 SYRWLLKVAVFAIPLPWIAIESGWLVAEFGRQPWVIEGVLPTAVAVSNLGVKTLLLTIAG 482
             +W+LK A+F+IPLPWIA+E+GW VAE+GRQPW +  +LP  VA S L    ++ ++  
Sbjct: 431 QKKWVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLA 490

Query: 483 FIAIYTTLLIIEMKLMLKAIRKGPEA 508
            +A+YT  LI E+ LM+K  RKGP +
Sbjct: 491 ILALYTIFLIAEVYLMVKFTRKGPSS 516