Pairwise Alignments

Query, 384 a.a., Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) from Variovorax sp. SCN45

Subject, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (313), Expect = 2e-33
 Identities = 101/360 (28%), Positives = 162/360 (45%), Gaps = 42/360 (11%)

Query: 15  IWWLLIGVLLVGFAVTDGFDLGSGMLLPFAARNDIERRV-VINSVGPVWEGNQVWLILGG 73
           I+ LL+G  +  +AV DG+DLG G+LLP   RND+ +R  +I S+GP W+ N+ WL+L  
Sbjct: 8   IYLLLLGFTVFMYAVLDGYDLGVGILLP---RNDVAQRDRMIASIGPFWDANETWLVLAV 64

Query: 74  GAVFAAWPQLYAVSFSGFYLAMFVILTALILRPVAFKFRSKRESPQWRARWDWVLFFSGF 133
           G +  A+P  +++ F+  YL   ++L ALI+R VAF FR+K ++   +  WD        
Sbjct: 65  GILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADH-KDHWDLCFKIGSL 123

Query: 134 VPALICGVAMGNVLQGVPFRFNNDMHIFYDGGFFGLLNPFAILCGLVSVAMLVMHGAAWL 193
           + AL  G  +G  + G    F +    +           FA+L  L   A  V  G AWL
Sbjct: 124 LAALTQGYMIGRYVVG----FESAPEAY----------AFAVLSALCVAAAYVYIGGAWL 169

Query: 194 LLKTAGPVAERARTYGMVAAVLTIALYALAGVLLATSIGGYRISSVIDAVGPSNPMLKTV 253
           +LKT G +  RA  +   A  L     A  GVL  + +  +  S+V +       ++   
Sbjct: 170 VLKTEGELQVRAARWSRKAGWL-----AALGVLSVSLVNPWVNSAVAERWFSFPEVILLA 224

Query: 254 ELHAGAWTANYAAHPWTMAAPAAGFVGALGALLGLALRRPVLSLLTAALGIAGIILSVGA 313
            +    +        +    P     G      G+ L            G++   L +  
Sbjct: 225 PVPIIVFATILVVDRYLKRVPTVNDAGVQWPFFGVVL----------IFGLS--FLGLAY 272

Query: 314 SMFPFILPSSIDPRASLTVWDSSSSHLTLFIMLVVTAFFIPIIVAYTSWVYHVLWGKVDE 373
           S FP I+P        +T   ++SS  TL ++ +     +P I+ YT +VY +  GK  +
Sbjct: 273 SFFPEIVP------GIMTAQQAASSPETLMVVGIGVVIVMPTILLYTFFVYRIFKGKATD 326