Pairwise Alignments

Query, 283 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 266 a.a., Cystine ABC transporter, periplasmic cystine-binding protein FliY from Pseudomonas fluorescens FW300-N2E2

 Score = 53.9 bits (128), Expect = 4e-12
 Identities = 55/265 (20%), Positives = 113/265 (42%), Gaps = 10/265 (3%)

Query: 7   MRFEPFDRRLFFAASGLLLAGCADLAPQRKAEQEAEARDQLGATGKLRAAINLGNPILAS 66
           M F    R L   + GL L+  A L  Q  A ++ +   ++   G+++  +    P  + 
Sbjct: 1   MNFSALRRNLLVGSLGLALS--AGLLGQAVAGEQLQ---KIKDAGEIKIGLEGTYPPFSF 55

Query: 67  RPAGGALSGVSVDLAREAARQLGLPVELVPFNSAGNVVEAVKTRQVDLAF--VAIDPVRA 124
               G L+G  V+ +   A++LG+ V+L     AG ++ A++++++D     V I   R 
Sbjct: 56  VDDSGKLTGFEVEFSEALAKELGVKVKLQTTPWAG-ILAALESKRLDAVVNQVTISEERK 114

Query: 125 ADMEYTAPYVV--IEGSYLVRNDSPLQSNAQVDRAGQRVVVGRGSAYDLFLTRELKAATL 182
              +++ PY V  I+   L +    L      D  G++V VG G+ Y+ ++  E+  A +
Sbjct: 115 KKYDFSEPYTVSGIQALVLTKKADELNIKKAADLDGKKVGVGLGTNYEQWVKAEVPGAQV 174

Query: 183 VRAPTSPAVTDQFLSQNLEVAAGVKQQLEADARRVGGVRLLPGRFMVIEQAMGVPKGRLA 242
                 P          ++     +      A++     +    F   E  + + KG   
Sbjct: 175 KTYDDDPTKFQDLRVGRIDTILIDRLAALEYAKKAKDTTVTSEAFSRQESGIALRKGEPE 234

Query: 243 AQAWLSSFIEEMKASGFVAEALKRH 267
             A ++  IE+++A G + +  +++
Sbjct: 235 LLAAVNKAIEKLRADGTLKKLSEKY 259