Pairwise Alignments

Query, 283 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 280 a.a., ABC transporter amino acid-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 78/280 (27%), Positives = 115/280 (41%), Gaps = 34/280 (12%)

Query: 11  PFDRRLFFAASGLLLAGCADLAPQRKAEQEAEARDQLGATGKLRAAINLGNPILASRPAG 70
           P  R L      L+    A++A       + E R +L   G L +    G P     P  
Sbjct: 7   PVKRLLPVMLGALISLSAANIARADATLDKIEQRHEL-VVGVLLS----GGPFGGIDPVN 61

Query: 71  GALSGVSVDLAREAARQLGLPVELVPFNSAGNVVEAVKTRQVDLAFVAIDPVRAADMEYT 130
               G +VDLA+E  RQLG  V+LVP   A N V+ ++  +VD        V  A+ME+T
Sbjct: 62  QKPRGFNVDLAQELGRQLGAEVQLVPVLPA-NRVQFLQQGKVD--------VLIANMEWT 112

Query: 131 A-----------PYVVIEGSYLVRNDSPLQSNAQVDRAGQRVVVGRGSAYDLFLTRELKA 179
           A           P+  + G+  V  DS +  +   D   Q V   +GS+Y   LT   + 
Sbjct: 113 AERGEILGFVPTPFYRVGGTAAVLKDSMI--SRWEDLKNQPVCTSQGSSYIKPLT---EL 167

Query: 180 ATLVRAPTSPAVTDQFLSQNLEVA----AGVKQQLEADARRVGGVRLLPGRFMVIEQAMG 235
              ++A  S + +   L  N  VA    A +   L AD     G R L          + 
Sbjct: 168 GVQIKAFKSSSESLLALRGNNCVAAVHDATLINPLIADNAEWQGYRALSPELNPAPSVIW 227

Query: 236 VPKGRLAAQAWLSSFIEEMKASGFVAEALKRHAIEGATVA 275
             KG    QA L   I+++  SG++ +A  R+ I  A+ A
Sbjct: 228 TRKGESDTQARLDPIIKQLHRSGWLIDAQTRNRITPASPA 267