Pairwise Alignments

Query, 283 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 271 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 24/234 (10%)

Query: 37  AEQEAEARDQLGATGKLRAAINLGNPILASRPAGGALSGVSVDLAREAARQLGLPVELVP 96
           A   A+  + + + G ++  + +  P      A     G   D+A+  A++LG+ V +VP
Sbjct: 28  APAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDADVAKLLAKELGVEVTIVP 87

Query: 97  FNSAGNVVEAVKTRQVDL--AFVAIDPVRAADMEYTAPYVVIEGSYLVRNDSPLQSNAQV 154
             +  N +  +++ QVDL  A + I   RA +++++ PY  I  S  V   + L      
Sbjct: 88  V-TGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQPYAGI--SIGVFGAADLAVTKPE 144

Query: 155 DRAGQRVVVGRGSAYDLFLTR-ELKAATLVRAPTSPAVTDQFLSQNLE---VAAGVKQQL 210
           D AG+ + V R S  D   T+   + A + R     +     LS  +E   V+  V  Q+
Sbjct: 145 DLAGKTIGVARASTQDTATTKIAPQDANIQRFDDDASAVQALLSGQVELIGVSNVVAAQI 204

Query: 211 EADARRVGGVRLLPGRF----MVIEQAMG--VPKGRLAAQAWLSSFIEEMKASG 258
           EA A         PGRF     + +Q  G  V KG      +++ F++++KA G
Sbjct: 205 EAAA---------PGRFNQKLQLSQQVQGIAVRKGSSEMLKFVNGFLDKVKADG 249