Pairwise Alignments

Query, 536 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 482 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score =  197 bits (502), Expect = 6e-55
 Identities = 149/500 (29%), Positives = 251/500 (50%), Gaps = 53/500 (10%)

Query: 37  ALLLSACAVGPDFKTPELPAAAQAPDYTPAPMPSRTVQA-EGPAGQAQELVAGRDIPAQW 95
           +L LSACAVGPD++ P+             P P+R  QA  G   +++         A W
Sbjct: 10  SLALSACAVGPDYRAPQ-------------PEPARISQAASGDYDRSR-------FEAAW 49

Query: 96  WDVFRSEPLDQLIRASLAQSPTLASAQAALRQAEATYEAKTGNLWPQVSAQLGVQRERAS 155
           W  F    LD L+  +LA++  L  A A LR A A  +  + +  P V+A       +A 
Sbjct: 50  WQQFEDPTLDALVGEALAENRELRIAYARLRAARAIRDDVSNDRLPTVTAGASADIGKAQ 109

Query: 156 E--ISTQVPGGQLLTLYNASVNVSYNLDVFGGTRRQIEGAQAAVDTQRYQVEAVYLTLTS 213
           +  ++ Q    +    Y+  +++++ LD+FG  +R++E ++A  D    ++  + ++L +
Sbjct: 110 QPGVTEQRVNAER---YDLGLDMAWELDLFGRIQRRLESSEAQADAVEAELYQLQVSLIA 166

Query: 214 NLVTT--AIREASLRAQLQATREVLQAQTEQLNVIEKQFDTGAIPKSIVLQQRTQVAQTQ 271
            LV     +R A LR ++   R+ L  Q     + E+  + G   +  VL+   ++A T+
Sbjct: 167 ELVDAYGQLRGAQLRERI--ARDNLANQRNSHELTEQLREAGVGSELDVLRADARLAATE 224

Query: 272 ATLPPIEKALAQTRHQLAVFAGRLPSEAGLPEFDLASLSLP---QALPLSLPSELARQRP 328
           A+LP +    A+ R+++A   G+   +  +   DLA   LP   +ALP+  P EL R+RP
Sbjct: 225 ASLPQLRAQQARARNRIATLLGQRADQLAV---DLAPRDLPAIAKALPIGDPGELLRRRP 281

Query: 329 DVRASEAQLHQASAAVGVATANLYPQIQLSASYGNNALRARDLFTGPTTLWNIGAGLTQP 388
           D+RA+E QL  A+A VGVATA+L+P++ LS   G  A R   + +     W +   ++  
Sbjct: 282 DIRAAERQLAAATADVGVATADLFPRVSLSGFLGFIAGRGSQIGSSAAQAWGVAPSISWA 341

Query: 389 IFNGGALRAQQRAAVAAYDSAAAQYRNTVL-------GAFQNVADALRALELDAIALQNQ 441
            F+ G++RA+ R A A  D+A A Y + VL        AF + A+A + L    ++L  Q
Sbjct: 342 AFDLGSVRARLRGAEADADAALASYEHQVLLALEESENAFSDYANAQQRL----LSLLRQ 397

Query: 442 AAAESLARQSLDLSTAQFRAGAVSYVTLLTAQQAWLQTHTALVQAQAARYADTAALFQAL 501
           + A   A +  ++   ++R G   ++ LL A++  L    A  QA+   Y    AL++AL
Sbjct: 398 STASRAAARQAEI---RYREGTADFLVLLDAERERLTAEDAQAQAEVELYRGVVALYKAL 454

Query: 502 GGGWW---NRAELANATLSP 518
           GGGW         +NA ++P
Sbjct: 455 GGGWEVTDKSLRTSNAAMAP 474