Pairwise Alignments

Query, 536 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 495 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score =  238 bits (606), Expect = 5e-67
 Identities = 165/510 (32%), Positives = 246/510 (48%), Gaps = 47/510 (9%)

Query: 6   NKASEDHPIEPRAVAARRLARWPVQGAVLGTALLLSACAVGPDFKTPELPAAAQAPDYTP 65
           N +S  H + P AVA                AL L AC +GPD++ P+LP A++      
Sbjct: 7   NPSSLKHALRPLAVAV--------------LALSLGACTLGPDYQRPDLPVASEFK---- 48

Query: 66  APMPSRTVQAEG--PAGQAQELVAGRDIPAQWWDVFRSEPLDQLIRASLAQSPTLASAQA 123
                   QAEG  PA  A  L  G     +WW ++    LD L+      +  +A+A+A
Sbjct: 49  --------QAEGWKPATPADALQRG-----EWWRLYGDAELDALVSRLNVSNQNIAAAEA 95

Query: 124 ALRQAEATYEAKTGNLWPQVSAQLGVQRERASEISTQVPG----GQLLTLYNASVNVSYN 179
             RQA A        L+P +S   GV R      ST   G    G +   Y A ++ S+ 
Sbjct: 96  QFRQARALVRGARSQLFPILSGSAGVSRSAQGSGSTSSTGSTFNGGVGESYEAGLSASWE 155

Query: 180 LDVFGGTRRQIEGAQAAVDTQRYQVEAVYLTLTSNLVTTAIREASLRAQLQATREVLQAQ 239
            D++G  RR +E  +A +      + A  L+L + LV T ++   +    +   + ++A 
Sbjct: 156 ADIWGRLRRNLEANRANMQASAADLAAARLSLQAELVQTYLQLRVIDEHQRLLDQTVEAY 215

Query: 240 TEQLNVIEKQFDTGAIPKSIVLQQRTQVAQTQATLPPIEKALAQTRHQLAVFAGRLPSEA 299
              L + E Q+  G +P+S V Q +TQ+  TQA    ++   AQ  H +AV  G  PSE 
Sbjct: 216 ARSLRLTENQYRAGIVPRSDVSQAQTQLKSTQAQAIDLKWQRAQMEHAIAVLVGVAPSEL 275

Query: 300 GLP-EFDLASLSLPQALPLSLPSELARQRPDVRASEAQLHQASAAVGVATANLYPQIQLS 358
           G+    D+  L    A+PL++PS+L  +RPD+ ++E Q+  A+A +GVA A  YP++ LS
Sbjct: 276 GIAVREDIPPLP---AIPLAVPSQLLERRPDIASAERQVMAANANIGVAEAAWYPELTLS 332

Query: 359 ASYGNNALRARDLFTGPTTLWNIGAGLTQPIFNGGALRAQQRAAVAAYDSAAAQYRNTVL 418
           AS G       DLF+ P   W++G  L   + + G  RA+   A A+YD   A YR TVL
Sbjct: 333 ASGGYRNSSFSDLFSVPNRFWSLGPQLALTLLDFGGRRAELERAEASYDQTVASYRQTVL 392

Query: 419 GAFQNVAD---ALRALELDAIALQNQAAAESLARQSLDLSTAQFRAGAVSYVTLLTAQQA 475
            +F+ V D    LR LE +A+    Q  A   A++SL L   Q+RAG V ++++ T Q  
Sbjct: 393 NSFREVEDYLVQLRVLEEEAVV---QREALEAAQESLRLIENQYRAGTVDFLSVATVQTT 449

Query: 476 WLQTHTALVQAQAARYADTAALFQALGGGW 505
            L      +     R   +  L  ALGGGW
Sbjct: 450 ALNNQRTNLTLLGDRLTASVLLIAALGGGW 479