Pairwise Alignments

Query, 536 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 523 a.a., RND transporter from Burkholderia phytofirmans PsJN

 Score =  206 bits (525), Expect = 1e-57
 Identities = 158/544 (29%), Positives = 234/544 (43%), Gaps = 36/544 (6%)

Query: 3   IQENKASEDHPIEPRAVAARRLARWPVQGAVLGTALLLSACAVGPDFKTPELPAAAQAPD 62
           +Q ++ S    + PRA+         V  A  G   LL+ACAVGPD+K P    AA+ P 
Sbjct: 1   MQSDRISRARMLAPRALTIA------VAAAFTG---LLAACAVGPDYKRP----AAEIPA 47

Query: 63  YTPAPMPSRTVQAEGPAGQAQELVAGRDIPAQWWDVFRSEPLDQLIRASLAQSPTLASAQ 122
                 P   V    PA Q             WW ++    L+ L       + T+A   
Sbjct: 48  SYKEAAPGWKVAE--PADQQDR--------GDWWSIYEDPQLNALEERLNTANQTVAQFA 97

Query: 123 AALRQAEATYEAKTGNLWPQVSAQLGVQRERASEIS-----TQVPGGQLLTLYNASVNVS 177
           AA RQA A         +P + A  G  R      S     T      +   +N  ++ S
Sbjct: 98  AAYRQARALVGEARAAYFPTIGASAGATRSGNGRSSGGNSTTATSRSGVSNSFNVQLDAS 157

Query: 178 YNLDVFGGTRRQIEGAQAAVDTQRYQVEAVYLTLTSNLVTTAIREASLRAQLQATREVLQ 237
           +  D++G   R +   +A        +    L+  + L  T     +L +  +   + + 
Sbjct: 158 WEPDLWGSVTRSVNAQKAGQQGAAADLANARLSAQATLAQTYFSLRALDSTQKLLDDTVA 217

Query: 238 AQTEQLNVIEKQFDTGAIPKSIVLQQRTQVAQTQATLPPIEKALAQTRHQLAVFAGRLPS 297
           A    L + + Q+  G   +S V+Q +TQ+   QA+        AQ  H +AV  G   S
Sbjct: 218 AYQRSLQLTQNQYAAGVAARSDVIQAQTQLQSAQASAIDNGVQRAQDEHAIAVLVGEPAS 277

Query: 298 EAGLPEFDLASLSLPQALPLSLPSELARQRPDVRASEAQLHQASAAVGVATANLYPQIQL 357
              +P   L +   P  +P  +PS L  +RPD+ ++E +   A+  +GVA A  +P + L
Sbjct: 278 TFSIPPAPLTAT--PPTVPAQMPSALLERRPDIASAERKAAAANEQIGVAIAAFFPSLTL 335

Query: 358 SASYGNNALRARDLFTGPTTLWNIGAGLTQPIFNGGALRAQQRAAVAAYDSAAAQYRNTV 417
           SAS G        L T P+  W +G  L   +F+ G  +AQ  AA AAYD   A YR TV
Sbjct: 336 SASGGFENSVFSQLLTAPSRFWTLGPQLAATLFDAGLRQAQTDAARAAYDGDVATYRQTV 395

Query: 418 LGAFQNVADALRALELDAIALQNQAAAESLARQSLDLSTAQFRAGAVSYVTLLTAQQAWL 477
           L AFQ+V D L +  + A  +  Q  A   ARQ+L + T +++AG V +V +LTAQ    
Sbjct: 396 LAAFQDVEDNLASQRILAQEIVVQQQAVDSARQALAIVTNEYKAGTVGFVNVLTAQTTAF 455

Query: 478 QTHTALVQAQAARYADTAALFQALGGGW----WNR--AELANATLSPTVPSAPAAATTTA 531
                L      R   +  L +ALGGGW     NR   ++A     P   +AP A +T  
Sbjct: 456 TAEQKLENIAGQRMVSSVGLVKALGGGWDASRMNRETGDVAAPAPLPASSAAPVAQSTAT 515

Query: 532 APVR 535
            P R
Sbjct: 516 PPAR 519