Pairwise Alignments

Query, 536 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 495 a.a., outer membrane efflux protein (RefSeq) from Shewanella sp. ANA-3

 Score =  187 bits (474), Expect = 1e-51
 Identities = 135/476 (28%), Positives = 226/476 (47%), Gaps = 24/476 (5%)

Query: 34  LGTALLLSACAVGPDFKTPELPAAAQAPDYTPAPMPSRTVQAEGPAGQAQELVAGRDIPA 93
           L TAL ++ CA+GPD++ PEL      P+   A M S+T   +G           +++ A
Sbjct: 35  LVTALSVAGCAMGPDYQRPELVL----PNQYQAQMLSQTTAEQGNV---------KEVSA 81

Query: 94  QWWDVFRSEP-LDQLIRASLAQSPTLASAQAALRQAEATYEAKTGNLWPQVSAQLGVQRE 152
             W  F  +P L  LI  +LA +  L  AQ+ L  A +        LWP+VS + G +R 
Sbjct: 82  LSWRHFYQDPVLISLIEHALANNLDLQMAQSRLLAARSKMTVVDSALWPEVSVKAGYERS 141

Query: 153 RASEISTQVPGGQLLTLYNASVNVSYNLDVFGGTRRQIEGAQAAVDTQRYQVEAVYLTLT 212
             S  ++  P     T  +    VS+ LD++G  RR  E A A   ++  ++   Y++L 
Sbjct: 142 LDSGATSTNPSPS--TTLDLGGAVSWELDLWGANRRASEAAMADYLSEVEKLRLTYVSLI 199

Query: 213 SNLVTTAIREASLRAQLQATREVLQAQTEQLNVIEKQFDTGAIPKSIVLQQRTQVAQTQA 272
           S++ +       +  +   + + +  + ++L++ + +   G I    V Q   ++  T+ 
Sbjct: 200 SDIASRYYEWLDIEQRYSVSIDTVGLRQKELDIAKLRHANGVISGLDVRQAEVELQSTKV 259

Query: 273 TLPPIEKALAQTRHQLAVFAGR----LPSEAGLPEFDLASLSLPQALPLSLPSELARQRP 328
           TLP ++       +QL +  G     LPS  GLPE    ++ LP  L   +PSEL   RP
Sbjct: 260 TLPTLDYERKYKINQLHILLGEYDYALPSPQGLPE----NMGLPYELNTGVPSELLTLRP 315

Query: 329 DVRASEAQLHQASAAVGVATANLYPQIQLSASYGNNALRARDLFTGPTTLWNIGAGLTQP 388
           DV+ +E Q+  A+A VG+A A  +P+  +S  YG      +D+F      W++  G++ P
Sbjct: 316 DVKIAEQQMIAANAEVGIAKAAFFPKFTISGVYGRENDHLKDIFDSNGVTWSLLGGISAP 375

Query: 389 IFNGGALRAQQRAAVAAYDSAAAQYRNTVLGAFQNVADALRALELDAIALQNQAAAESLA 448
           IFN G + A+   A  A   +   YRN VL A+ +V DAL  L+    A++ Q      +
Sbjct: 376 IFNRGKIAAEYDIATEAAKQSMLSYRNVVLTAYFDVNDALNNLKRAQEAIKAQKELVESS 435

Query: 449 RQSLDLSTAQFRAGAVSYVTLLTAQQAWLQTHTALVQAQAARYADTAALFQALGGG 504
                L+  +++ G  + + L+ AQ+       A  +    +     AL++ALGGG
Sbjct: 436 SAYARLARLRYQNGVATSLDLMDAQRQLFSAQLAYSEILRDKQLAKIALYRALGGG 491