Pairwise Alignments

Query, 397 a.a., major facilitator superfamily MFS_1 from Variovorax sp. SCN45

Subject, 389 a.a., major facilitator family protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  150 bits (379), Expect = 6e-41
 Identities = 106/362 (29%), Positives = 172/362 (47%), Gaps = 17/362 (4%)

Query: 24  YFAHIGFFNPYLPLWLKDLGLPIFTISLLASVQSITRVFAPYAWGALSDHTGQRVKLLRF 83
           +F+ +G   PYL ++ ++ G     I  L ++   TR+ AP  W  ++D TG R +L++ 
Sbjct: 21  FFSILGTMIPYLGVFFENRGFNPQEIGFLLAILMATRIVAPNVWAKVADRTGMRSELIKM 80

Query: 84  SAAVALASSFGLWWHGGAWWLALVLLVMFTHTSSMMSLTEAAMAQLVAGDWGRYGRIRLC 143
            A  A+ +    ++HGG  ++AL L +     +++++  E    + +  +  RYG+IR  
Sbjct: 81  GAGAAMLAYLSFFYHGGFVYMALSLALYTFFWNAILAQLEVITLETLGENASRYGQIRSF 140

Query: 144 GSAGFLLTVFVAGEWFERFGMKHFPAWAAGTLAIVLIATMKLPDLREPPAAHDAVKAPIG 203
           GS G++  V  AG    ++G +  P         +L+  + LP       A+ AV+ P G
Sbjct: 141 GSIGYICLVVGAGFAIGQWGTEVLPYIGLVLFTGMLVCALPLP-------ANRAVR-PQG 192

Query: 204 ----PVLRNPAVRWFFAALFFQVMSHFSVYAFFSLYLDSIGYSKSTIGLLWALSVVAEIV 259
               P+     + WF  +     MS    Y FF LYL   GY+++  G+  AL  +AEIV
Sbjct: 193 QERQPLKWTKPIIWFMISAMLLQMSAGPFYGFFVLYLKQAGYTEAAAGIFVALGAMAEIV 252

Query: 260 WFFLQGRLIGLLPMPRWMLVCGIAAVARLGLTAGLGGFVVALI-VAQWLHALSFAAHHTT 318
            F    RL+G   +   +LV  IA  A   L    G   + L+ ++Q LHA +F   H  
Sbjct: 253 MFMFAPRLLGRYGV-NTLLVVSIAMTAVRWLLVAFGVESMLLLGLSQVLHAFTFGLTHAA 311

Query: 319 CIAVVSRRFPGQLRGRGQALFTVIGYGFGGVLGVLLGGAV---AQAFGYRTMFAAAAALA 375
            I  V R F    R +GQAL+  + +G GG LG  + G +        +  +FAA  A A
Sbjct: 312 SIQFVHRHFDASHRSQGQALYASLSFGVGGALGTWICGYIWGDGSGAVWSWVFAATCAFA 371

Query: 376 VL 377
            +
Sbjct: 372 AM 373



 Score = 26.6 bits (57), Expect = 0.001
 Identities = 12/49 (24%), Positives = 24/49 (48%)

Query: 211 VRWFFAALFFQVMSHFSVYAFFSLYLDSIGYSKSTIGLLWALSVVAEIV 259
           +RW  A  FF      ++  +  ++ ++ G++   IG L A+ +   IV
Sbjct: 11  LRWLCACYFFFFSILGTMIPYLGVFFENRGFNPQEIGFLLAILMATRIV 59