Pairwise Alignments

Query, 319 a.a., Fructose ABC transporter, permease component FrcC from Variovorax sp. SCN45

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (533), Expect = 6e-59
 Identities = 118/302 (39%), Positives = 174/302 (57%), Gaps = 8/302 (2%)

Query: 18  LALLGACIFFATQSDRFLTGGNLSLILQQVMVVGVIAIGQTLIILTAGIDLSCGMVMALG 77
           +ALL   +  +  +  F T  NL  IL+Q  V  +IA+G TL+ILTAGIDLS G V+AL 
Sbjct: 36  IALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLALC 95

Query: 78  GIIMSKFATELGLPAPVAILCGIGVTTLFGLLNGLLVTRIKLPPFIVTLGTLNIAFAITQ 137
           G   +     + +P  VA+   +      G ++G+++ + K+  FI TL T+ +   +T 
Sbjct: 96  GAFAATLVA-MEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTM 154

Query: 138 LYSSSQTI----TDLPGGLTGLGTTFSIGNAEVAWGAVLMLVLYGLAWFVLRETAAGRHI 193
           +Y+  + I    TD        GT +++G     W   LM+V++  AW++L  T  GR++
Sbjct: 155 VYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVW---LMVVVFAGAWYLLNHTRFGRYV 211

Query: 194 YAVGNNAEATRLVGIPTQRVLLGVYVAAGVLYGIASLLSVARTGVGDPNAGQTENLDAIT 253
           YAVG N  ATRL GI   RV +GVY   G+L  +A ++  +R     P AG    LDAI 
Sbjct: 212 YAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIA 271

Query: 254 AVVLGGTSLFGGRGIVLGSLIGVLIVGVFRNGLTLMGVSSIYQVLVTGVLVILAVTADQL 313
           AVVLGGTSL GG+G ++G+LIG LI+G   N L L+ VSS YQ++   V+++LAV  D  
Sbjct: 272 AVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVDNK 331

Query: 314 SR 315
           ++
Sbjct: 332 NK 333