Pairwise Alignments

Query, 265 a.a., Fructose ABC transporter, ATP-binding component FrcA from Variovorax sp. SCN45

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  144 bits (364), Expect = 3e-39
 Identities = 87/251 (34%), Positives = 138/251 (54%), Gaps = 7/251 (2%)

Query: 10  VMQAKGLVKRYGQVTALDGVDFELREGEILAVIGDNGAGKSSLIKALSGAVVPDEGQILL 69
           ++    + K +  V ALD     +  G ++A++G+NGAGKS+L+K L+G    D G I  
Sbjct: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64

Query: 70  DGKPVNFRNPLDARRAGIETVYQDLAVAPAMTIYENLFLGRELRRPGFMGNVLRMLDKKK 129
            G+PV+F+ P D++ AGI  ++Q+L + P +TI EN+FLGRE+  P   G +L      +
Sbjct: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSP--FGRIL----WDE 118

Query: 130 MLSESTARMADLKVGIQSMTQAVETLSGGQRQCVAVARSAAFARHVVIMDEPTAALGVKE 189
           M  ++   +A L V   + T   E LS G++Q V +A++ +F   V+IMDEPT AL   E
Sbjct: 119 MHRKADQLLARLNVKHSAKTLLGE-LSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTE 177

Query: 190 GNMVLELIRRVRDRGLPVVLISHNMPHVFEVADRIHVARLGRRAAVLDPKKISMSDTVAV 249
              +  +I  +R++G  +V ISH +  +FE+ D I V R G+          +    + +
Sbjct: 178 TESLFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEM 237

Query: 250 MTGAMTAEQLP 260
           M G    EQ P
Sbjct: 238 MVGRKLEEQYP 248



 Score = 94.0 bits (232), Expect = 6e-24
 Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 12/208 (5%)

Query: 29  VDFELREGEILAVIGDNGAGKSSLIKALSGAVVPDEGQILLDGKPVNFRNPLDARRAGIE 88
           V F L++GEIL V G  GAG++ L+K + GA+  + G I L+G+ VN  +P D    GI 
Sbjct: 272 VSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGIA 331

Query: 89  TVYQDL---AVAPAMTIYENLFLGR--ELRRPGFMGNVLRMLDKKKMLSESTARMADLKV 143
            + +D     +   +++ EN+ L    +L +    G  +R  D+  +  +   R+ ++K 
Sbjct: 332 YISEDRKGDGLVLGLSVKENMSLCALDQLSK----GVQIRHADEV-IAVDDFIRLFNIKT 386

Query: 144 GIQSMTQAVETLSGGQRQCVAVARSAAFARHVVIMDEPTAALGVKEGNMVLELIRRVRDR 203
              S  Q +  LSGG +Q VA+A+       V+I+DEPT  + V     + +LI + +  
Sbjct: 387 --PSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAE 444

Query: 204 GLPVVLISHNMPHVFEVADRIHVARLGR 231
           G+ ++L+S  MP V  ++DRI V   GR
Sbjct: 445 GMSIILVSSEMPEVLGMSDRILVMHEGR 472