Pairwise Alignments

Query, 265 a.a., Fructose ABC transporter, ATP-binding component FrcA from Variovorax sp. SCN45

Subject, 518 a.a., xylose ABC transporter ATP-binding protein from Pseudomonas syringae pv. syringae B728a

 Score =  147 bits (371), Expect = 4e-40
 Identities = 86/258 (33%), Positives = 144/258 (55%), Gaps = 10/258 (3%)

Query: 10  VMQAKGLVKRYGQVTALDGVDFELREGEILAVIGDNGAGKSSLIKALSGAVVPD---EGQ 66
           ++Q  G+VK +G V AL+G+D  ++ GE + + G+NGAGKS+L+K LS AV P    EG+
Sbjct: 5   LLQMNGIVKSFGGVKALNGIDITVKPGECVGLCGENGAGKSTLMKVLS-AVYPYGTWEGE 63

Query: 67  ILLDGKPVNFRNPLDARRAGIETVYQDLAVAPAMTIYENLFLGRELRRPGFMGNVLRMLD 126
           IL DG+P+  ++  +   AGI  ++Q+L + P +++ EN+F+G EL  PG   N   M+ 
Sbjct: 64  ILWDGQPLKAQSISETEAAGIVIIHQELTLVPDLSVAENIFMGHELTLPGGRMNYPAMMH 123

Query: 127 KKKMLSESTARMADLKVGIQSMTQAVETLSGGQRQCVAVARSAAFARHVVIMDEPTAALG 186
           + + L      M +LKV   ++   V    GG +Q V +A++      ++I+DEP++AL 
Sbjct: 124 RAESL------MRELKVPDMNVALPVSQYGGGYQQLVEIAKALNKKARLLILDEPSSALT 177

Query: 187 VKEGNMVLELIRRVRDRGLPVVLISHNMPHVFEVADRIHVARLGRRAAVLDPKKISMSDT 246
             E  ++L++I  ++ +G+  V ISH +  V  V D + V R G+  A      + +   
Sbjct: 178 RSEIEVLLDIIHDLKAKGVACVYISHKLDEVAAVCDTVSVIRDGKHIATTAMADMDIPKI 237

Query: 247 VAVMTGAMTAEQLPAEAH 264
           +  M G   +   P E H
Sbjct: 238 ITQMVGREMSNLYPTEPH 255



 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 9/205 (4%)

Query: 26  LDGVDFELREGEILAVIGDNGAGKSSLIKALSGAVVPD-EGQILLDGKPVNFRNPLDARR 84
           +D V F LR GEIL + G  GAG++ L+ AL GA      G++ L+G+ ++ R PL + R
Sbjct: 280 VDDVSFLLRRGEILGIAGLVGAGRTELVSALFGAYPGRYSGEVWLNGQAIDTRTPLKSIR 339

Query: 85  AGIETVYQDL---AVAPAMTIYENLFLGRELRRPGFMGNVLRMLDKKKMLSESTARMADL 141
           AG+  V +D     + P + + +N+ L           N+ R +D +  L      ++ +
Sbjct: 340 AGVCMVPEDRKRQGIIPDLGVGQNITLAVL----DSYSNMTR-IDAEAELGSIDREISRM 394

Query: 142 KVGIQSMTQAVETLSGGQRQCVAVARSAAFARHVVIMDEPTAALGVKEGNMVLELIRRVR 201
            +   S    + +LSGG +Q   +A+       V+I+DEPT  + V     + +L+  + 
Sbjct: 395 HLKTASPFLPITSLSGGNQQKAVLAKMLLTRPRVLILDEPTRGVDVGAKYEIYKLMGALA 454

Query: 202 DRGLPVVLISHNMPHVFEVADRIHV 226
             G+ ++++S  +  V  V+DR+ V
Sbjct: 455 AEGVSIIMVSSELAEVLGVSDRVLV 479