Pairwise Alignments

Query, 277 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

Subject, 285 a.a., Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) from Pseudomonas fluorescens FW300-N2E2

 Score =  106 bits (265), Expect = 5e-28
 Identities = 83/272 (30%), Positives = 129/272 (47%), Gaps = 19/272 (6%)

Query: 2   ISGKTTLIAHLGFPTEAFKAPMIYNPWFDKQG---------IDAVVVPMGVKPEDYAASL 52
           +S  T L   +G   +A + P ++    D QG         +DA+ +  G  P+   A+ 
Sbjct: 3   MSNITVLAGLIGAGIQASRTPALHEHEGDAQGMRYLYRLIDLDALKLDSGALPDLLKAAE 62

Query: 53  PQIFKFSNLRGALVTMPHKVTTMSLVDEVTPTARVAGACNAILKRPDGTLLGDQFDGAGF 112
              F      G  +T P K   + L+DE++P AR  GA N ++ + DG  +G   D  GF
Sbjct: 63  RMSFT-----GLNITFPCKQAIIPLLDELSPEARGIGAVNTVVLK-DGKRIGHNTDCLGF 116

Query: 113 VRGVERKGRLFKGTRVLVSGTGGVGSAIAASIAAAGAAELMLFDMSEASAGALAARLREH 172
             G  R        RV+  G GG G+A+A ++ A G   L +FD+  + A ALA  L +H
Sbjct: 117 AEGFRRGLGDVARRRVVQMGAGGAGAAVAHALLAEGVQTLSIFDVEVSRAEALANNLNQH 176

Query: 173 YPQMKVATG---SKDPAGYDVVVNATPLGMKEGDPLPFDVDRIDPGTFVGEVVMKTEYTP 229
           +   +   G   S   A  D +VN TP+GM +   +P  V+ +    +V E+V     T 
Sbjct: 177 FGVGRARAGHDLSAAMAEADGLVNTTPMGMAKLPGMPVPVELLHGQLWVAEIVYFPLETE 236

Query: 230 LLEAAKAKGCQVQVGTDM-LFEMIPAYLEFFG 260
           LL  A+A GC+   G +M +F+ + A+  F G
Sbjct: 237 LLRNARALGCRTLDGGNMAVFQAVKAFELFSG 268