Pairwise Alignments

Query, 277 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

Subject, 288 a.a., shikimate 5-dehydrogenase from Synechococcus elongatus PCC 7942

 Score = 93.2 bits (230), Expect = 6e-24
 Identities = 76/279 (27%), Positives = 126/279 (45%), Gaps = 10/279 (3%)

Query: 2   ISGKTTLIAHLGFPTEAFKAPMIYNPWFDKQGIDAVVVPMGVKPEDYAASLPQIFKFSNL 61
           ++G+T L+  +G P E   +P+I N    + G+D   VP  VK  D A +L  +     +
Sbjct: 4   LTGRTRLLGIIGDPIEHSLSPLIQNAAIAELGLDYCYVPFPVKGADLATALAGLAAI-GV 62

Query: 62  RGALVTMPHKVTTMSLVDEVTPTARVAGACNAILKRPDGTLLGDQFDGAGFVRGVERKGR 121
           +G  VT+PHK   M L+ +V+  A+  G+ N + +   G  +G   D  GF+  ++    
Sbjct: 63  QGFNVTIPHKQAVMPLLSQVSELAQSVGSVNTVWQTEQG-WVGTNTDVLGFLAPLQTLRS 121

Query: 122 LFKGTRVLVSGTGGVGSAIAASIAAAGAAELMLFDMSEASAGALAARLREHYPQMKVATG 181
            + G RV++ G GG   A+ A     G + +           A      +    + +   
Sbjct: 122 DWSGCRVVLLGCGGAARAVVAGCLQLGCSAIATVVRDAQKGDAFQQSWGDRADSLTIHDW 181

Query: 182 SKDP---AGYDVVVNATPLGMK---EGDPLPFD-VDRIDPGTFVGEVVMKTEYTPLLEAA 234
           S  P   +  D+VVN TPLGM    E  PL      ++ P T   +++     T  L+ A
Sbjct: 182 SDIPDVLSTADLVVNTTPLGMDPHIERSPLDNSAAQQLRPETIAYDLIYTPSPTRFLQQA 241

Query: 235 KAKGCQVQVGTDMLFEMIPAYLEFFGFGTASP-EELRAV 272
            A+GC    G +ML +   A L+ +    A P + +R+V
Sbjct: 242 IAQGCHAIDGLEMLVQQGAAGLKIWTGAEAVPVDTMRSV 280