Pairwise Alignments

Query, 393 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Variovorax sp. SCN45

Subject, 415 a.a., M20 family metallo-hydrolase from Methanococcus maripaludis S2

 Score = 70.9 bits (172), Expect = 6e-17
 Identities = 87/419 (20%), Positives = 166/419 (39%), Gaps = 42/419 (10%)

Query: 1   MSRTLQLAEQLISRPSVTPDDAGCQQILGERLALLGFTLETIESGPA-------DFRVTN 53
           +  T++L+  LIS  SV P   G  +   E+   +   LE      +       ++   +
Sbjct: 5   LDETIELSSDLISINSVNPTFGGIGE--KEKSIYIKNKLEEYNKNYSIKNCEITEYNTVD 62

Query: 54  LWAVRRPADAA----ATTRTLVFAGHTDVVPTGPVEQWTSHPFTPTHRDGKLYGRGACDM 109
              + RP   +        TL    H D+VP G +  W S PF    +DG +YGRG+ D 
Sbjct: 63  SEGIERPNIVSKYDFGKNDTLTIISHMDIVPEGDLGLWNSDPFKAEIKDGIIYGRGSEDN 122

Query: 110 KTSVAAFVTSIEDFLQAVPEPRLTLALLLTSDEEGPGVDGTVVVCNTLAARGEVI---DY 166
              + +    ++   +   +P+  L L+  +DEE     G   + N      E+    D 
Sbjct: 123 HKGIVSSFLLLKMIFEEKIDPKYNLNLIFVADEEDGSKYGLSYLVNNF--EDEIFSSKDL 180

Query: 167 CIVGEPTAVERCGDMIKNGRRGTMSGKLTVKGVQGHIAYPHLAKNPVHSVAPALAELVAI 226
            IV +    E  G+ I+   +  +  K  + G Q H + P    N    +A +  + +  
Sbjct: 181 IIVPDFGMPE--GEFIEIAEKNILWLKFKITGKQCHGSVPENGIN-ADLIAFSFGKGLYD 237

Query: 227 NAAGGWDAASNPYFQP--TSWQISNFHSGTGASNVIPGSAVIDFNFRFSTESTPESLQQR 284
              G +D   NP F P  ++++ +   +     N IPG   ++F+ R   +  P+ +   
Sbjct: 238 KLYGKYDGI-NPIFNPAFSTFEPTILKNNIENINTIPGYVELNFDCRIIPKYDPKEVLSD 296

Query: 285 VHAVLDAHQVD---YTLAWTIGGLPFLT---------------TPGELVTAVQGAIRDET 326
           +   ++  + +   + L + I     ++                  E+V  +  AI++  
Sbjct: 297 IENYIEVFKNEIEKHILHFDISEKENISITYEILKLEKAEETKKDSEVVKKLGSAIKNVL 356

Query: 327 GIETELSTSGGTSDARFIAKICRQVVELGPVNASIHKIDEHIDVAEIETLKNIYVRTLK 385
             E+ L   GG + A F+ +        G  + + H+ +EHI +  +  +  +Y+  LK
Sbjct: 357 NKESVLCGMGGGTVAAFLREKGYNTAVWGIGDETAHQPNEHIKIENLIKMAEVYLDILK 415