Pairwise Alignments

Query, 481 a.a., Carboxyl-terminal protease (EC 3.4.21.102) from Variovorax sp. SCN45

Subject, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

 Score =  111 bits (278), Expect = 7e-29
 Identities = 93/322 (28%), Positives = 154/322 (47%), Gaps = 39/322 (12%)

Query: 77  LDPHSQYFDKKSFKEFREGTTGRFVGVGIEISQEDGLIKVVSPIEGSPA-FRAGLKPNDL 135
           +DPH+ Y   ++ ++F+        G+G  +   D    + S + G PA     L   D 
Sbjct: 223 VDPHTSYLSPRNAEQFQSEMNLSLEGIGAVLQMTDDYTIIRSLVAGGPAALSKQLGEGDR 282

Query: 136 ITKI-----DDTAVRGLSLNEAVKRMRGEANTKV-LLTIFRKDESRTFPVTITREEIRTQ 189
           I  +     D   V G  L++ V+ ++G   +KV LL +    ++++  VTI R++IR +
Sbjct: 283 IIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGSKVKLLVLPEGKDAKSHVVTIVRDKIRLE 342

Query: 190 --SVRGKIMEPG---YGWIRLSQFQERTVDDFVKKIDEMYKEDPNLKGLVLDLRNDPGGL 244
             +V+ +++E      G + +  F      D  K + E+  +   + G+++DLRN+ GG 
Sbjct: 343 DRAVKSEVIEKAGKKIGVLEVPSFYVGLAQDTEKLLAELKAK--KVDGIIVDLRNNGGGA 400

Query: 245 LDAAVAVSSAFLPENVTVVTTDGQLAESKSIYKAAPEYYQRRSGSDPLRSLPAALKTVPL 304
           L  A A+S  F+     V   D               Y +    SD   S+  +    P+
Sbjct: 401 LTEATALSGLFITSGPVVQVRDS--------------YGRVNVNSDTDGSISYS---GPM 443

Query: 305 VVLVNEGSASASEIVAGALQDHKRATIMGSQTFGKGSVQTVRPLG-------PDTG-LKI 356
            VL+N  SASASEI A A+QD+ RA I+G  +FGKG+VQ  R L         + G ++ 
Sbjct: 444 TVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSLNHIYDLFDKELGYVQY 503

Query: 357 TTARYYTPSGTSIQAKGIVPNV 378
           T  ++Y   G S Q KG+VP++
Sbjct: 504 TIQKFYRIDGGSTQNKGVVPDI 525