Pairwise Alignments

Query, 1292 a.a., FAD/FMN-containing dehydrogenases from Variovorax sp. SCN45

Subject, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

 Score = 78.6 bits (192), Expect = 1e-18
 Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 38/252 (15%)

Query: 995  LPKQTARALLDIEDADYVPIIRNPKATTPETEAVFYFPGCGSERLFSQVGLATQAMLWHA 1054
            +PK+    L ++ D +Y  I+ N K        V +F GC  +    ++G +   +L   
Sbjct: 241  VPKEKTSFLEEVSD-EY--IVENEKMR------VAFFTGCLVDFRLQEIGKSAIRVLNAH 291

Query: 1055 GVQTVLPPGYLCCGYPQRGSGQFDKAEKMITDNRVLFHRVANTLNYLDIKTVVVSCGTCY 1114
            GV  ++P   +CCG P   +GQ D +E +   N  +F       N L++ +VV  C  C 
Sbjct: 292  GVSVIIPKNQVCCGSPFIRTGQTDISESLKKQNLEIF-------NKLNVDSVVTLCAGCG 344

Query: 1115 DQLQGYQFDKIFPGCRIIDIHEYLLEKGITLAEAGGGGYLYHDPCHSPMKQQDPMKTVKA 1174
              L+    +K F   +++DI E L++ G+   +       YHDPCH    Q+  ++  K 
Sbjct: 345  STLKNDYKEKKF---KVMDITEVLVKVGLIDYKPLDITVTYHDPCHLRRGQKVYLEPRKI 401

Query: 1175 LVGDNVLK------NDRCCGESGTLGVSRPDISTQIRFRKESELKKGEAALRDSGKVGEK 1228
            L     LK       D+CCG  G +   +P+++  I  RK + +   +A           
Sbjct: 402  LESIPKLKFIEMEIPDQCCGAGGGVRSGKPEVAEAIGKRKANMIYATDADY--------- 452

Query: 1229 DNVKILTSCPSC 1240
                ++T CP C
Sbjct: 453  ----LITVCPFC 460



 Score = 35.0 bits (79), Expect = 2e-05
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 6/48 (12%)

Query: 874 EEFEDVADHCTVCHKCLTPCPVKIDFGDVSMNMRNLLRKMGQKSFRPG 921
           E F++   +CT C +C+  CP +ID       + N + K+ +K+F+ G
Sbjct: 180 EAFDENIYNCTTCGRCVEVCPKEIDI------VHNAVEKLREKTFKKG 221