Pairwise Alignments

Query, 437 a.a., Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB from Variovorax sp. SCN45

Subject, 434 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 78/330 (23%), Positives = 133/330 (40%), Gaps = 37/330 (11%)

Query: 10  SALATTLVMPVL-----AQAQTEIQWWH--SMDGALNDWVNDLAKQFNESQKDYKVVATY 62
           SALA    M +L     A A T ++W H  ++   +  W  D+A ++        +   +
Sbjct: 16  SALAAVAGMALLFDASHASADTVVKWLHLETVPAYVKMW-EDIAAKYESEHAGVDIQLQF 74

Query: 63  KGEYDQSMAAGIAAFRAGNAPDILQVFEVGTATMMYSKGAIKPVADVMKEGGQKFDPKAY 122
             E +   A      ++ +AP     +  G        GA+  + + M+  G  ++ K+Y
Sbjct: 75  L-ENEAFKAKLPTLLQSDDAPHFFYSWGGGVLKQQSETGALMDLTEAMRADGGAWE-KSY 132

Query: 123 IPAVAGYYTAPNGQMLSFPFNSSTTVFYYNKDAFKTAGLDPEKAPATWPEVVAAAAKLKA 182
            PA    +T  + ++ + PF   T  F+YNK+ F+  G+  E    TW + + A   LK 
Sbjct: 133 NPAALKGFTFDD-RIYAVPFKMGTISFFYNKELFQKGGVKAEDI-KTWDDFLTAVKTLKE 190

Query: 183 SGSQCPFT----TSW---MSWAQLESFSAWHNTSYATKNNGFGGLDARLEFNSPLHVRHF 235
           +G   P        W     W+ L   +         KNN   G      F  P  ++  
Sbjct: 191 AGI-TPIAGGGGDKWPLHFYWSYLVMRNGGQQVFEDAKNNEGEG------FLQPAIIKAG 243

Query: 236 ENLSNMAKQGLFV--YKGRASKPIT--SFTSGECAMFIGSSGSYASVKR---DAKFKFAE 288
           E L+ + K   F   Y G A+ P T   F  G+ AM +    + A+ +    D K   AE
Sbjct: 244 EQLAELGKLEPFQGGYLG-ANWPQTLGLFGDGKAAMILSFENTEATQRANSGDGKGLAAE 302

Query: 289 SALPY-YPDVQG--APQNTIVGGASLWVMS 315
           +   + +P V+G        +GG + W ++
Sbjct: 303 NIGRFPFPAVEGGAGAATDTLGGLNGWAVT 332