Pairwise Alignments

Query, 437 a.a., Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB from Variovorax sp. SCN45

Subject, 424 a.a., ABC transporter for Lactose, periplasmic substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score = 48.9 bits (115), Expect = 3e-10
 Identities = 67/316 (21%), Positives = 124/316 (39%), Gaps = 33/316 (10%)

Query: 11  ALATTLVMPVLAQAQTEIQWWHSMDGALNDWV-NDLAKQFNESQKD--YKVVATYKGEYD 67
           ALA    + V A    EI  W   D   N  +  +   ++ ++  D  + +V   K + +
Sbjct: 16  ALAGASFLGVTAAQAKEITIW-CWDPNFNVAIMKEAGARYTKTHPDVTFNIVDFAKLDVE 74

Query: 68  QSMAAGIAAFRAGNAPDILQVFEVGTATMMYS-KGAIKPVADVMKEGGQKFDPKAYIPAV 126
           Q +  G+++  A   PDI+ + + G    + S  GA  P++  +   G       + P  
Sbjct: 75  QKLQTGLSSGTADALPDIVLIEDYGAQKYLQSFPGAFAPLSGTVDYSG-------FAPYK 127

Query: 127 AGYYTAPNGQMLSFPFNSSTTVFYYNKDAFKTAGLDPE-KAPATWPEVVAAAAKLKASGS 185
               T  +GQ+   PF+S  T  YY KD  + AG  PE     TW   +    +++    
Sbjct: 128 VELMTL-DGQVYGMPFDSGVTGLYYRKDYLEAAGFKPEDMQDLTWDRFIEIGKQVEEKTG 186

Query: 186 QCPF----TTSWMSWAQLESFSAWHNTSYATKN-NGFGGLDARLEFNSPLHVRHFENLSN 240
           +         + +    ++S   W+       N  G   L A L           E +  
Sbjct: 187 KKMMGLDPNDAGLVRIIMQSAGQWYFDKEGKPNIAGNAALKAAL-----------ETIGK 235

Query: 241 MAKQGLFVYKGRASKPITSFTSGECAMFIGSSGSYASVKR--DAKFKFAESALPYYPDVQ 298
           + +  ++      S  + +FTSG+ A  +       +VK   D    +  + +P    ++
Sbjct: 236 IMQANIYKPANGWSDWVGTFTSGDVATVVTGVWITGTVKAQPDQSGNWGVAPIPAL-SIE 294

Query: 299 GAPQNTIVGGASLWVM 314
           GA   + +GG+S +V+
Sbjct: 295 GATHASNLGGSSWYVL 310