Pairwise Alignments

Query, 293 a.a., Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) from Variovorax sp. SCN45

Subject, 305 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  129 bits (325), Expect = 6e-35
 Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 9/281 (3%)

Query: 8   RSSWLPWALLAPQLIIVGVFFFWPAGQALVQSLQQQDAFGNSITWVGFDNFVALWNDSTY 67
           ++ W     +AP + +V +FF  P    L  SL +    G    W+G  N+  ++ D+ +
Sbjct: 18  QAGWRGLIYIAPAMALVTLFFVLPVLFTLWMSLHKWPLLGEP-AWIGLRNYTRMFTDARF 76

Query: 68  MASFQTTLIFSTLVTVLGLAIALLLAVFADRVVRGSSFYRSVLILPYAVAPVVTGLLWSF 127
             +   T  ++ +VT+   A+A  LA+F ++     S YR+++ LP  V      LLW +
Sbjct: 77  FNALGFTAHYTLIVTIAIFAVAFPLAIFVEKQRPLVSLYRTIVFLPVVVGLASASLLWVW 136

Query: 128 MFSSSIGIVAYWLKKMGFS---WNHLLNGGDAMALVVMAAVWKQISYNFLFFLAGLQSIP 184
           + +   G+ A     +G +    N L     A   +++  VWK   +  +  L GLQ+IP
Sbjct: 137 LANVDSGLFAPLFDMLGLTSGRINLLAKFDTAFLTIIVMVVWKIAGFTMIILLTGLQAIP 196

Query: 185 KSLIEAAAIDGARPMRRFWTIQFPLLTPTTFFLLVINMVYAF--FDTFAIIDATTQGGPG 242
             L EAA IDGA   +RF  +  PL+  T    L++++  +   FD F I+   T GGP 
Sbjct: 197 AELTEAARIDGAGRWQRFRHLTLPLMRRTMALALILSVTGSILAFDQFYIM---TSGGPQ 253

Query: 243 KDTATLVYRVYFDGFRGMDFGGAAAQSVVLMAIVICLTVLQ 283
               ++VY ++   F   + G  AA S+ L+ I++ L+V+Q
Sbjct: 254 NKMISVVYYIFNQSFVSFNLGYGAALSIALLLILVTLSVVQ 294