Pairwise Alignments

Query, 309 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) from Variovorax sp. SCN45

Subject, 354 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) from Pseudomonas fluorescens FW300-N2E2

 Score =  144 bits (363), Expect = 3e-39
 Identities = 101/320 (31%), Positives = 170/320 (53%), Gaps = 17/320 (5%)

Query: 1   MIEVDRVISRRLDTGVPLVSQVSKYIISAGGKRLRPALLLLMSGALGYTG---EQRFNLA 57
           ++   + +   L+   P ++ V + +  AGGK++RP ++LL +  +   G   ++ +  A
Sbjct: 35  LVRFRQEVELALEPQAPYLTDVERQMF-AGGKKIRPLVMLLSARLIAQDGPLPDKVYKGA 93

Query: 58  AVVEFIHTATLLHDDVVDESTLRRGRATANESFGNPASVLVGDFLYSRAFQMMLDA---- 113
           A +E +H ATL+HDD+VDE+ LRRG  + + + G+  ++L+GD  + +A +    A    
Sbjct: 94  ASLEMLHVATLIHDDIVDEAQLRRGLPSVSAARGSKTALLIGDLQFVQALRGFATAVDTE 153

Query: 114 NNMRVMQILAEATNVIAEGEVLQLMNM----HDASLDEAAYLRVIRSKTAKLFEASTRLA 169
            +M +++++ +    I  GE+ +L       HDA L  A Y + I  KTA LF  + +  
Sbjct: 154 RDMTLVRLVLDTAFDICRGELDELDRTLPEDHDARL--ARYYQTIDRKTAVLFRLACQGG 211

Query: 170 AVLAGTTPEVEEACATYGQALGTAFQVIDDVLDYAGDANETGKNVGDDLREGKTTLPLIF 229
             LAG           +G+ALG AFQ++DDVLD     +  GK  G DL  G+ +LPLI+
Sbjct: 212 IDLAGGRSRDARRGGFFGRALGRAFQIMDDVLDVVEYESSAGKQSGIDLLLGRLSLPLIY 271

Query: 230 AMQR--GTPAQSQLVRAAIEAGDTAQLGKVVEIVRETGALDASREAAAAEAQRAIHALNG 287
           AM+    T A SQ +R         +LG  ++ +R+ G +D +  AA  EA +A+  L  
Sbjct: 272 AMETLGPTHAISQSLREGTPL-TGHRLGDALDDLRDCGCIDKAYAAARREALQALFYLEP 330

Query: 288 FPSNLHASGLLQLAAQLLER 307
           FP   +   L +LA  +++R
Sbjct: 331 FPPGRYRDALEELALHVVDR 350