Pairwise Alignments

Query, 309 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) from Variovorax sp. SCN45

Subject, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

 Score =  138 bits (347), Expect = 2e-37
 Identities = 85/235 (36%), Positives = 128/235 (54%), Gaps = 8/235 (3%)

Query: 3   EVDRVISRRLDTGVPLVSQVSKYIISAGGKRLRPALLLLMSGALGYTGEQRFNLAAVVEF 62
           ++D  + + ++    L    SK+++ AGGKR+RP L +L          +    A  VE 
Sbjct: 10  KIDSELKKYMEKDTKLYG-ASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVEL 68

Query: 63  IHTATLLHDDVVDESTLRRGRATANESFGNPASVLVGDFLYSRAFQMML---DANNMR-V 118
           IH  TL+HDD++D    RRG  T +  +G P ++L GD LY++AF+ +    D+N    V
Sbjct: 69  IHNYTLVHDDIMDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEV 128

Query: 119 MQILAEATNVIAEGEVLQL-MNMHDASLDEAAYLRVIRSKTAKLFEASTRLAAVLAGTTP 177
           +++L++A   + EG+   +       +LDE  YL +I  KT  L  A   + AV+A  TP
Sbjct: 129 LKVLSKACVEVCEGQTEDMEFEERFPTLDE--YLEMISKKTGALIVAPVEIGAVMADCTP 186

Query: 178 EVEEACATYGQALGTAFQVIDDVLDYAGDANETGKNVGDDLREGKTTLPLIFAMQ 232
           E  EA   Y + +G  FQ+ DDVLD  GD    GK VG D+ EGK T+ +I AM+
Sbjct: 187 EEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAME 241