Pairwise Alignments

Query, 577 a.a., Type IV fimbrial assembly, ATPase PilB from Variovorax sp. SCN45

Subject, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

 Score =  458 bits (1179), Expect = e-133
 Identities = 261/558 (46%), Positives = 366/558 (65%), Gaps = 16/558 (2%)

Query: 22  ALVSAGKLPAKTAED--IYQKSLSGRTSFIAELTGTGAVSAADLAHTLSSAFGAPLLDLD 79
           A++   +L + T E   + Q S SG TS    L       A +L   LS  FG P  DL 
Sbjct: 7   AILRQAELISATQEQAVVTQVSASG-TSVPEALLELSIFHAQELTEQLSHIFGLPETDLS 65

Query: 80  AIDHQRLPKDLLDPKLCLAYRIVVLSKRNNRLIVATADPSDQQAAEKIKFASQMGVDWVI 139
             D+  L + L   +L   Y  + ++K+ N L++A +DP+  QA E+ +FA+ + V+  +
Sbjct: 66  RYDYANLCQQLGLRELITRYDALPIAKQGNLLLLAVSDPTLLQAEEEFRFATGLQVELAL 125

Query: 140 AEYDKLS---RMIEAAAVSAAETINSIVGSEFEFDEVTADTSGDANE-QAIAEV--EDAP 193
           A++  L    R +   ++  A       G E   DE+        +E Q+I ++  +D+P
Sbjct: 126 ADHRALQAAIRRLYGRSIQGAAN----QGKEISQDELANLVKVSDDELQSIEDLSQDDSP 181

Query: 194 VVRFLHKMLLDAVGMRASDIHFEPYEHNYRVRFRVDGELREIASPPTVIKDKLASRIKVI 253
           V RF++++LLDAV   ASDIHFEPYE+ YR+R R DG L E   P + +  +LA+RIK++
Sbjct: 182 VSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKIL 241

Query: 254 SRLDISEKRVPQDGRMKLKIGPDRVIDFRVSTLPTLFGEKIVVRILDPSSARLGIDALGY 313
           S+LDI+E+R+PQDGR+KL++  D  ID RVSTLPTL+GEKIV+R+LD S+A L ID LGY
Sbjct: 242 SKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGY 301

Query: 314 DADEKARLLHAIGRPYGMVLVTGPTGSGKTVSLYTCLNLLNQPGVNIATAEDPSEINLPG 373
           +  +K   L+A+ RP GM+L+TGPTGSGKTVSLYT L +LN   +NI+TAEDP EINL G
Sbjct: 302 NPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSG 361

Query: 374 VNQVNVNERAGLTFAAALRAFLRQDPDIIMVGEIRDLETADISIKAAQTGHLVLSTLHTN 433
           +NQV V  + G  FA ALR+FLRQDPD++MVGEIRDLETA+I++KAAQTGHLVLSTLHTN
Sbjct: 362 INQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTN 421

Query: 434 DAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCTVCRAPADVPREALLDAGFQEEQL 493
            A  T+ R+ NMG+ PFN+ASS+ LI AQRLARRLC  C+    V   ALL + F  +  
Sbjct: 422 SAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIA--VRPSALLQSQFAFQPN 479

Query: 494 DGSWKPYRPVGCSACSGGYKGRVGIYQVMPISEAIQEIILRDGSALDIAQQSEREGVRSL 553
           +  ++     GC+ C+GGY GRVGIY+VM  +  + E I++  S   I + ++  G+++L
Sbjct: 480 EILYEA-NAAGCNECTGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTL 538

Query: 554 RQSGLRKVMQGLTSLEEV 571
           ++SGL K+ +G+TS  E+
Sbjct: 539 QESGLEKLREGITSFAEL 556