Pairwise Alignments

Query, 409 a.a., Type IV fimbrial assembly protein PilC from Variovorax sp. SCN45

Subject, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

 Score =  305 bits (781), Expect = 2e-87
 Identities = 163/396 (41%), Positives = 244/396 (61%), Gaps = 4/396 (1%)

Query: 18  FEWEGKDRNGKLVRGELRAAGENQVQAALRRQGVLASKIKKRRM----RSGKKIKPKDIA 73
           + W+G + NGK V G++ A  E +V+  L+ Q +   K+KK  +    R   ++K KDI 
Sbjct: 12  YRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLTHRVKSKDIT 71

Query: 74  IFTRQLATMMKAGVPLMQSFDIVGRGNANASVAKLLNDIRSDVETGTSLSMAFRKFPKYF 133
           I TRQLATM+  GVP++Q+  +VG  +  A +  +L  I   VE GT LS A R    +F
Sbjct: 72  ILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTASAHF 131

Query: 134 DNLYCNLVEAGEAAGILEELLDRLATYMEKTEAIKSKIKSALMYPTSVIVVAFVVVAIIM 193
           D LY +LVE GE +G L E+ +RLATY EK+E +++K+  AL+YP+ V++VA  V  +++
Sbjct: 132 DTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVSYLML 191

Query: 194 IFVIPAFKQVFTSFGADLPAPTLFVMAISEFFVSYWWLIFGGLGGGIYFFLQAWKRNERV 253
             VIP F+ +F  FGA+LP  T  V+ +S +  +Y    F  +   I+      K + ++
Sbjct: 192 TMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKALRKNSFQI 251

Query: 254 QRVMDRALLRVPIFGVLIEKSCVARWTRTLATMFAAGIPLVEALDSVGGASGNTVYGDAT 313
           +    R  L+ PI G ++ K+ +A+++RTLAT FAAGIP++ +L +    SGN  +  A 
Sbjct: 252 RLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVHFETAI 311

Query: 314 AKIQQEVSTGTSLTAAMTNVNLFPSMVIQMTAIGEESGSIDHMLGKAADFYESEVDDMVA 373
            ++ ++ + G  +  AM N   FP MV+QM  IGEESG +D ML K A  YE EVD+ V 
Sbjct: 312 NEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEVDNTVD 371

Query: 374 GLSSLMEPIIIVFLGTIIGGIVVSMYLPIFKLGQVV 409
            L  ++EP+IIVFLGT++GG+VV+MYLPIF L  V+
Sbjct: 372 NLGKILEPLIIVFLGTVVGGLVVAMYLPIFNLMSVL 407