Pairwise Alignments

Query, 409 a.a., Type IV fimbrial assembly protein PilC from Variovorax sp. SCN45

Subject, 405 a.a., type II secretion system protein from Pseudomonas syringae pv. syringae B728a

 Score =  418 bits (1074), Expect = e-121
 Identities = 210/399 (52%), Positives = 287/399 (71%), Gaps = 3/399 (0%)

Query: 14  KEFVFEWEGKDRNGKLVRGELRAAGENQVQAALRRQGVLASKIKKRRMR---SGKKIKPK 70
           K  V+ WEG D+ G    GEL       V+A LR+QG+  +K++K+ +     GKKIKP 
Sbjct: 7   KVIVYTWEGVDKKGTKTSGELSGHNLALVKAQLRKQGINPTKVRKKSVSIFGKGKKIKPL 66

Query: 71  DIAIFTRQLATMMKAGVPLMQSFDIVGRGNANASVAKLLNDIRSDVETGTSLSMAFRKFP 130
           DIA F+RQ+ATMMKAGVPL+QSFDI+  G  N ++  L+  ++ +V  G S + A R+ P
Sbjct: 67  DIAFFSRQMATMMKAGVPLLQSFDIISEGAENPNMRALVGSLKQEVSAGNSFATALRQKP 126

Query: 131 KYFDNLYCNLVEAGEAAGILEELLDRLATYMEKTEAIKSKIKSALMYPTSVIVVAFVVVA 190
           +YFD+L+CNLV+AGE AG LE LLDR+A+Y EKTE +K+KIK A+ YP +V++VA +V  
Sbjct: 127 EYFDDLFCNLVDAGEQAGALESLLDRVASYKEKTEKLKAKIKKAMTYPIAVLIVALIVSG 186

Query: 191 IIMIFVIPAFKQVFTSFGADLPAPTLFVMAISEFFVSYWWLIFGGLGGGIYFFLQAWKRN 250
           I++I V+P F+ VF SFGA LP  TL V+ +S+    +W  I G      + F +A+K++
Sbjct: 187 ILLIKVVPQFQSVFASFGAQLPTFTLMVIGLSDVVQKWWLAIVGLFFVSFFIFKRAYKQS 246

Query: 251 ERVQRVMDRALLRVPIFGVLIEKSCVARWTRTLATMFAAGIPLVEALDSVGGASGNTVYG 310
           ++ +  +DR LL+VPI G LI KS VAR+ RTLAT FAAG+PLVEALDSV GA+GN V+ 
Sbjct: 247 QKFRDSLDRLLLKVPIIGPLIFKSSVARYARTLATTFAAGVPLVEALDSVAGATGNVVFK 306

Query: 311 DATAKIQQEVSTGTSLTAAMTNVNLFPSMVIQMTAIGEESGSIDHMLGKAADFYESEVDD 370
           +A  K++Q+VSTG  L  +M +  +FPS+ IQMTAIGEESG++D ML K A +YE EVD+
Sbjct: 307 NAVIKVKQDVSTGMQLNFSMRSTGVFPSLAIQMTAIGEESGALDTMLDKVATYYEDEVDN 366

Query: 371 MVAGLSSLMEPIIIVFLGTIIGGIVVSMYLPIFKLGQVV 409
           MV  L+SLMEP+I+ FLG I+GG+V++MYLPIF+LG VV
Sbjct: 367 MVDNLTSLMEPMIMAFLGVIVGGLVIAMYLPIFQLGNVV 405