Pairwise Alignments

Query, 409 a.a., Type IV fimbrial assembly protein PilC from Variovorax sp. SCN45

Subject, 409 a.a., type II secretion system protein from Burkholderia phytofirmans PsJN

 Score =  274 bits (701), Expect = 3e-78
 Identities = 147/406 (36%), Positives = 233/406 (57%), Gaps = 10/406 (2%)

Query: 10  QPTHKEFVFEWEGKDRNGKLVRGELRAAGENQVQAALRRQGVLASKIKKRRMRSGKKIKP 69
           +P   +  F+W G D +G    G L A      ++ L+R  +   ++           + 
Sbjct: 8   RPPSSDMRFKWRGVDADGVRKNGALIAPDAAVARSVLKRDNLFILELTAHGPAPRPTTRA 67

Query: 70  KDIAIFTRQLATMMKAGVPLMQSFDIVGRGNANA--SVAKLLNDIRSDVETGTSLSMAFR 127
            DI +FTRQLA++++AG+PL  + D++ +   +    +A+++  +  D+  G   S A +
Sbjct: 68  GDITLFTRQLASLLRAGLPLAPALDLLAQAETSRRQGMARIVGALARDITGGLRFSAALQ 127

Query: 128 KFPKYFDNLYCNLVEAGEAAGILEELLDRLATYMEKTEAIKSKIKSALMYPTSVIVVAFV 187
           + P  F+ LYC LVE GEAAG L  +L R+A   E+  A ++K+++AL YP +++V+A  
Sbjct: 128 RHPAQFNALYCQLVEVGEAAGALAAVLARIADDRERAAAQRAKVRAALTYPVAILVLAMA 187

Query: 188 VVAIIMIFVIPAFKQVFTSFGADLPAPTLFVMAISEFFVSYW----WLIFGGLGGGIYFF 243
           + A ++++V+P FKQ+F  FGA LPAPT FV+A+S   V+ W    + +    G    F 
Sbjct: 188 ITAALLVWVVPTFKQIFDGFGARLPAPTQFVLALSSG-VARWSIPAFAMIFATGSAATFL 246

Query: 244 LQAWKRNERVQRVMDRALLRVPIFGVLIEKSCVARWTRTLATMFAAGIPLVEALDSVGGA 303
           L   + +E  +    R  L +P+ G L+   C ARW+R L T+ +AG PL +A DS+  A
Sbjct: 247 L---RHSEAARIRFARVSLTIPVAGPLLRTLCAARWSRALGTLLSAGTPLADAFDSLTHA 303

Query: 304 SGNTVYGDATAKIQQEVSTGTSLTAAMTNVNLFPSMVIQMTAIGEESGSIDHMLGKAADF 363
           +GN  +  AT +I   +  G  L AAM     FP  V+Q  A+ EESG++D ML   A  
Sbjct: 304 TGNAFFDRATVEIAARLRRGERLAAAMRAARCFPPEVVQPIAVAEESGALDTMLIDVASL 363

Query: 364 YESEVDDMVAGLSSLMEPIIIVFLGTIIGGIVVSMYLPIFKLGQVV 409
            + +VD+ +  LSSL EP++IV LG ++GG+V++MYLPI +LG VV
Sbjct: 364 ADRQVDEKIGTLSSLCEPLVIVVLGALVGGLVIAMYLPIIQLGNVV 409