Pairwise Alignments

Query, 1212 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

Subject, 1085 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  547 bits (1409), Expect = e-159
 Identities = 313/758 (41%), Positives = 439/758 (57%), Gaps = 56/758 (7%)

Query: 21  RIVKVRRDYNSWVASETLEDYALRYTPQRFRKWSEWRVANTAFGAASFLILEAVGATLLV 80
           + +K RR YN+ V +E +EDY+LR   + FR+W  W +ANTA G  +F+ LEA+GA L++
Sbjct: 14  KALKRRRIYNALVVNEAIEDYSLRSAAKSFRRWPCWLLANTALGGITFMALEAIGALLVL 73

Query: 81  QYGFANAFWAILATGLIIFLAGLPISVYAARYGVDMDLLTRGAGFGYIGSTLTSLIYASF 140
             GF N+  AIL    II L GLPIS YA+RY VD+DLLTRGAGFGY GST+TSLIYAS+
Sbjct: 74  NNGFVNSTLAILCVSAIIILTGLPISYYASRYNVDIDLLTRGAGFGYYGSTVTSLIYASY 133

Query: 141 TFIFFALEAAVMAYALELALGIPPVWGYLVCALVVIPLVTHGVSAISRLQLWTQPLWLLM 200
           T IFFA+EAA+MA AL + LGIP   GYL+ ++V+IPLV +G++ I++LQL+TQP+W+++
Sbjct: 134 TIIFFAIEAAIMAKALSVGLGIPIHLGYLISSVVIIPLVFYGITFINKLQLYTQPVWVVL 193

Query: 201 LVVPFGYVLMRDPGAFAGIVHYNGVRAGTQGFNLHLFGAALTVGIALITQMGEQADYLRF 260
            V+ F Y+L  DP A    V Y G      GF+  LFG AL+V  +L+ Q+GEQ DYLRF
Sbjct: 194 TVILFAYILTCDPTALDAWVEYTGKDGMAAGFDPLLFGGALSVLFSLVPQIGEQVDYLRF 253

Query: 261 MPARTAATARRWWAGVLAGGPGWVVLGVLKMLGGALLA-YLAITHMVPAERAVDPNQMYL 319
           +P +T      WW  + A GPGW+V+G LK+LGG+ LA Y           A+DP  +Y 
Sbjct: 254 LPDKTPENKGAWWLSMAAAGPGWIVVGCLKLLGGSFLAVYFMQKAGARISDALDPVNLYY 313

Query: 320 AAYEYVFPNYGWAVAATALFVVISQLKINVTNAYAGSLAWSNFFSRVAHSHPGRVVWVVF 379
             +  +    G  +A T +FV++ Q+KINVTNAYAGSLAWSNFFSR++HSHPGR +W+VF
Sbjct: 314 NGFSALLGTGGLTLATTTIFVIVCQVKINVTNAYAGSLAWSNFFSRISHSHPGRALWLVF 373

Query: 380 NALIAFMLMEMNVFEALGDVLGLFANIAIAWMMAVVADLVINKPLGLSPPGIEFKRAHLW 439
           N  I+ +LM+  VF  L  VL ++A  A++W+ A+ ADLVI KPLGLSP  IE+KRA+L+
Sbjct: 374 NVTISLLLMQFGVFYLLHSVLMVYAMFAVSWVGALFADLVILKPLGLSPRHIEYKRANLY 433

Query: 440 DINPVGVGAMALASGLSITAHLGLFGPLAQAFSALIALGTALVASPLLAWATGGKYYLAR 499
           ++NPVG GAM +ASG+S+  + G FGPL QAF+ L+AL  ++  +  +A  TGGKYY+AR
Sbjct: 434 NLNPVGFGAMLMASGVSLLCYRGAFGPLPQAFAPLVALVVSVPTAVGIALLTGGKYYMAR 493

Query: 500 GSWAHGAVAFAPAPGPRAVRWAKVEHDDSGQGSYRRLTVQHCVICEREYEGPDMAHCPAY 559
            +      A                                C  C   YE  DM +CPAY
Sbjct: 494 KAEPVSLTASTT-----------------------------CTTCGNSYEAGDMVYCPAY 524

Query: 560 QGAICSLCCTLDARCGDLCKPHASLSAQWSAVLRWLLPRRSWRYLDTGLGHFLLLMLVIV 619
              +CSLCC+LD+ CG  CK  A  +A              + +L      F L    I 
Sbjct: 525 DEPVCSLCCSLDSVCGGFCKRLAHATAGRKEAWDEAKIPLPFLHLSRRAKIFCLHFFNIF 584

Query: 620 PLLAVVFGVLYQQELRAFGEGALELASQADVAAALAGVQKLSLRSGFLKAYMALLVIAGI 679
              A++F VL     R  G G+  L    ++ A +               ++   +I GI
Sbjct: 585 CAQALIF-VLCYAYFRNTGLGSPLL---EEICATI---------------FVFSSLINGI 625

Query: 680 VAWWLVLAHQSRKVAQEESNRQTHLLVREIELHRETDRALQAAKQAADEAREVAEHAKLA 739
             WW  L  ++R   ++E +R  H L  E++  RE   A  A  ++A + R + E+A + 
Sbjct: 626 WVWWSSLIQETRLRTEDELDRHIHELNEEVK-RREAMSAQLA--ESASQQRLILENASIG 682

Query: 740 AELAKQAADQANQAKSRYISAISHELR----TPLNSIL 773
               ++        +   +  ++ +LR     PL +IL
Sbjct: 683 IAYVREKRVVWGNNRFMRLCGLADDLRQGATMPLGTIL 720



 Score = 50.4 bits (119), Expect = 8e-10
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 9/117 (7%)

Query: 865  RADEKRVLQILINLLGNAIKFTAAGQVTLRLAYAREFASV--EIEDTGPGMPPEDIERIF 922
            R D++R+ QIL+NL+ NA +     +  + +   R   +V  EI D G G+  E +  I 
Sbjct: 964  RGDQRRIEQILVNLIQNAYQALQNRRQGIHMRTYRADGTVCFEIVDEGHGITQEQLTHIC 1023

Query: 923  EPFARGNAVGAAGASAAPGAGLGLTIAKMLTDLMGGEMKVRSTPGEGSLFCVRLFLP 979
            +PF               G GLGL+++  +    GG M+  S PG G+   +R   P
Sbjct: 1024 DPFYTTKRDQG-------GTGLGLSVSAGIIKEHGGNMQFSSEPGRGTTVTLRFQAP 1073