Pairwise Alignments

Query, 717 a.a., Cell division protein FtsH (EC 3.4.24.-) from Variovorax sp. SCN45

Subject, 655 a.a., ATP-dependent metalloprotease FtsH (RefSeq) from Shewanella loihica PV-4

 Score = 55.1 bits (131), Expect = 1e-11
 Identities = 62/248 (25%), Positives = 96/248 (38%), Gaps = 33/248 (13%)

Query: 488 SEDFRALLAVHEAGHGVAYGLLFGR--------APQEIKINVASFEGGYNSYEQRKAWSK 539
           SE+ + + A HEAGH +   L+            P+   + V  F    ++  Q    S+
Sbjct: 409 SEEEKEMTAYHEAGHAIVGCLVPEHDPVHKVTIIPRGRALGVTFFLPEADAISQ----SR 464

Query: 540 ENLRDRICVSLAGRAAELLVFGEAATTSGAVQDFIQATACAAQYVRHFAFGTRLSRTDIS 599
             L  +I V+  GR AE L++G    ++GA QD   AT  A   V  + F  +L     +
Sbjct: 465 RKLESQISVAYGGRIAEELIYGSERVSTGASQDIKYATTIARNMVTQWGFSDKLGPVLYA 524

Query: 600 NDPED-----------NRNTDVAS-TDPEIEALLVQEHARAVSLLEAHAPALMAVVDALM 647
            D  +           + + + AS  D E++ L+   + RA   L  +   L A+ DALM
Sbjct: 525 EDEGEVFLGRSMAKAQHMSDETASIIDLEVKQLIDNNYGRAHQFLTDNMDILHAMKDALM 584

Query: 648 R---------DGSIAPAELAAMLDLPDPAAGSAGAPTDAYSALLASFRARHAELLPPSSA 698
           +         D  +A  E+ A  D      GS G         + S     A    P+S 
Sbjct: 585 KYETIDATQIDDLMARREVRAPADWNMDENGSNGKGNGGRGEAVTSPEPSEAPAAEPASE 644

Query: 699 HVGGGSIP 706
              G   P
Sbjct: 645 PKEGDESP 652