Pairwise Alignments

Query, 456 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreT (EC 1.3.1.1) from Variovorax sp. SCN45

Subject, 489 a.a., glutamate synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

 Score =  131 bits (330), Expect = 4e-35
 Identities = 133/476 (27%), Positives = 213/476 (44%), Gaps = 64/476 (13%)

Query: 22  RLDPAQYAKNFCDAHPPLNVV---QANIEAERCYYCYDAPCQTACPTGIDIPTFIRRIAD 78
           ++DPA+  KN  +    LN     + N +A RC  C    C   CP G  IP F   +  
Sbjct: 17  KIDPAERIKN--NKEFVLNQEFGKKINQQASRCMDCGVPFCHNGCPIGNIIPEFNDAVYR 74

Query: 79  GNLRGAARTILEENPLGGMCARVCPTEVLCEQACVRNTNESKPVEIGLLQRHATDAFFE- 137
            +   A   +   N       RVCP    CE ACV   N+  P+ I  +++   +  ++ 
Sbjct: 75  DSWEEAWNILSSTNNFPEFTGRVCPAP--CETACVLGINQD-PITICNIEKTIVERAYQE 131

Query: 138 ---KPGTPLFVRAADTGRRVAVVGAGPAGLACAHRLAVLGHQVVLFDARPKLGGLNEYGL 194
              KP TP     + TG+ VA++G+GPAGLA A +L   GH V +F+   K+GGL  +G+
Sbjct: 132 GYAKPKTP----RSRTGKTVAIIGSGPAGLAAAEQLNAAGHSVTVFERDEKVGGLLRFGI 187

Query: 195 ASYKTVNGFAQREIEWLLSVGGIEVRCNHALGRELHLDALAAEYDAVFLGLGLAGVNALG 254
             +K       R+I  L+   G++   N  +G +++   L  E+DAV L  G      L 
Sbjct: 188 PDFKLGMDVIDRKIN-LMEQAGVKFVVNAHIGVDINAQQLRQEFDAVLLTGGSTVPRDLS 246

Query: 255 L--GEQTGVRDAVDFIAELRQAASPADV------AIGRHVVVIGGGMTAVDAAVQSRKLG 306
           +   +  GV  A+ F+A+  + A+  D+      A G+HVVVIGGG T  D    S + G
Sbjct: 247 IPGRDLKGVYFAMQFLAQNNRRANGMDLKGEEIHAKGKHVVVIGGGDTGSDCVGTSNRHG 306

Query: 307 AEDVSIVYRRGQESMGASADEQ---------------SWAKENGVRIIHW--AAPKALRA 349
           A  ++ V     E M     ++               S + E G    HW     + +  
Sbjct: 307 AASITQV-----EIMPIPPQKRPVNMPWPQYPMILRTSTSHEEGCE-RHWNILTKEFIGN 360

Query: 350 KGGVLRGIDFA----RTALAGGKL---VETGESLALQADMVLCAIGQSFIAT----VLED 398
           + G + G+  A    + A  G +       G    +  DM   A+G  F+      VL  
Sbjct: 361 EQGEVTGLRIADIVWKDAAPGERPSFDEVVGSERVIPCDMAFLAMG--FLHPEPHGVLAQ 418

Query: 399 SGVQL-QGGRISTDTEGRSSRSKVWAGGDARFGGRDLTVEAVEDGKQAALSIDRHL 453
            G++L + G ++T  +  +++  V+A GD R  G+ L V  + +G++ A ++D  L
Sbjct: 419 LGIKLDERGNVATQ-DFATNQKGVFAAGDMR-TGQSLVVRCINEGRECARAVDTFL 472