Pairwise Alignments

Query, 436 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreA (EC 1.3.1.1) from Variovorax sp. SCN45

Subject, 340 a.a., dihydroorotate dehydrogenase 2 from Synechococcus elongatus PCC 7942

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 66/323 (20%), Positives = 130/323 (40%), Gaps = 26/323 (8%)

Query: 3   DLSIDFVGIRSPNPFWLASAPPTDKEINVVRAFEA-GWGGVVWKTVGEDPNVVNVHGPRY 61
           DLS+D++G++  +P  + +A P  +    + A EA G   +V  ++ E+     V     
Sbjct: 2   DLSMDYLGLKLRSPLVVGAAAPLSERTEQLPALEAAGASAIVLHSLFEE----QVEAEHQ 57

Query: 62  AVSYAADRRVTGFNNIELISDRPLRTNLEEMTRVKRNWPDRALVASVMVPC----TEESW 117
           AV    +     +      +  P    +  +  +++    +A V   ++      ++  W
Sbjct: 58  AVWQQLEVGSHHYAESLTYAPEPAWFPIGPVHYLRQIEKAKAQVQIPIIASLNGTSDNGW 117

Query: 118 KNILPMIEDTGCDGLELN-FGCPHGMSERGMGAAVGQVPEYIQMVAEWCKHYSKLPLIVK 176
            +    IE  G D LELN +  P   ++ G      +V      V E  +  ++LPL VK
Sbjct: 118 VDYARRIEGAGADALELNLYALPVDPNQSG-----AEVEAQYLRVVEQVRAATQLPLAVK 172

Query: 177 LTPNVADIRPAARAAKKGGADAVSLINTINSIMGVDLDAMAMFPNTGGMGSHGGYCGPGA 236
           L+P  +      R   + GA A+ L N       +D++++ + P             P  
Sbjct: 173 LSPFFSSPGHMIRQFAQAGAQAIVLFNRFYQ-PDIDIESLDVVPRL-------ILSNPQD 224

Query: 237 KPIALHMVAEIARDPQTAGLPISGIGGVSTWRDAAEFIALGSGSVQVCTAAMVYGFKIVQ 296
           + + LH +A +        +  +  GG+    D    +  G+ + Q+  A + +G  ++Q
Sbjct: 225 QRLPLHWIALLYGQ---VPVDFAATGGIQRADDVIRMVMAGAATTQIVGALLRHGPDVLQ 281

Query: 297 DLCDGLSNFMDEKGYQNLEQLRG 319
            +   L  ++ E     L  L+G
Sbjct: 282 RIEADLKTWLAEHDCPALSLLQG 304