Pairwise Alignments

Query, 558 a.a., FIG138928: iron-regulated membrane protein from Variovorax sp. SCN45

Subject, 377 a.a., PepSY-associated TM helix from Pseudomonas syringae pv. syringae B728a

 Score = 58.2 bits (139), Expect = 6e-13
 Identities = 80/395 (20%), Positives = 145/395 (36%), Gaps = 52/395 (13%)

Query: 17  LHTWCGLWFSWLLFAVFLTGTLAVFDEPITHWM-TPEHRAEEAAEAAEAAAPKTTDAATA 75
           +HTW  L  +  L  + +TG   +F   I H +    H  E  A+       +   AA A
Sbjct: 12  VHTWSSLICTLFLLMLAVTGLPLIFHHEIDHLLGDAPHYKEMPADTPRLDLEQLARAAEA 71

Query: 76  GRAQRLAWGVAYMAEHHPAARMWELWPSDAKGGGGLTVYWLDADNRYVSA---SLDPATG 132
                          H P   M      D    G + +    A     S+   +LD  TG
Sbjct: 72  ---------------HRPGEVMQYFGWDDEDPNGVMAITAATAGTEPNSSHTFALDARTG 116

Query: 133 RPLAAAAGAGAHAVRATLGGHHFVDFHYELHAGTVGLWIVGIAAMAMLVALLSGVITHKR 192
             L   +  G   +         +  H +++A   G  ++    +  +VA++SG + +  
Sbjct: 117 EALEMPSANGGFMMV-------MLRLHVDMYANLPGKLLLAFMGLLFVVAIVSGTVLYAP 169

Query: 193 IFK--DFFTFRPKKGQRS-WLDAHNAVAVLTLPFQFMIAYTGLVISGTSFMPAGKVLHYG 249
             +  +F   R  K +R+ WLD HN + V+TL +  ++  TG++ +    + A       
Sbjct: 170 FMRKLEFGQVRVNKSRRTRWLDLHNLIGVVTLTWALVVGVTGVISACADLLIA------S 223

Query: 250 TGSTAQAQFVSELSDGVKPRRAGRAMAVPDLEAFAARGQQLTGQPVRAVVIDHPGDAGAR 309
             + A A  ++   D     +   A  + ++   AA G Q       A  I  PG     
Sbjct: 224 WRNDALATMIAPYKDAPPLTQRAPATRLLEIAESAAPGMQ-------ADFIAFPGTR--- 273

Query: 310 IGIYGWNGDDEALRRINANTGMAQFSAATG--ELLRVRLPGASDGGAALLAQSTMSGLHM 367
                ++ +      +  NT +    A     +   + +    +    + A      LH 
Sbjct: 274 -----FSSEHHYAVFLKGNTHLTAHLATPVLIDAQTLHVTAVVERPWYMDALGMSQPLHF 328

Query: 368 ATFGGWGMKWLYFLCGLAGTAMMGTGAILFIVKRR 402
             +GG  MK L+ +  +    ++G+G  L+ V+RR
Sbjct: 329 GDYGGMPMKILWAVLDVLTIIVLGSGVYLWWVRRR 363